Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pte10g01567 | ATGTCTGCACCATTATTTCTTGTCTTCCTCTCGCTTCTCACCACTTCGCATGTCTCAGCATCACGTCACAATCCCAAAGATTTGGTTCGTTCATCGTGCTCCCATGCCAGCTACCCGAACCTTTGCCTTCGGACACTCTCCTCCTACTCGGGTCCCGCCTGTACACCCAAGGAACTAGCCCAGGTTGCCGTCAAAGTCAGCCTCACTCGTGCTCGCAGGGTCTCTGCCTACCTTAAGAACCAAACCTCTTCAGACTCCCCATCTGGAAAAAGACAGCGAGGTGCTGTCAGTGATTGCATCGAACAGATGGCAGACTCTATTGACGACCTAAGTAAAACACTCAACGAACTCCAACAACTCAGAGGCACCCCCGCAACGTTCCGGTGGCATCTGAGCAACGCACAGACGTGGGTCAGTGCAGCCTTAACCAATGACGATACATGTCTTGATGGGTTTGGAGAAGACGACGGCGTTGGCAAGCTCAAGTCTGATGTGTGGCGTAAGGTAAGGAACGTTGCTAGGGTTACCAGTAACGCATTGTACATGATCAATCGCCTTGATGACACTCATGGTCGGCCAAGATCAAAACTTTGA | 594 | 0.5135 | MSAPLFLVFLSLLTTSHVSASRHNPKDLVRSSCSHASYPNLCLRTLSSYSGPACTPKELAQVAVKVSLTRARRVSAYLKNQTSSDSPSGKRQRGAVSDCIEQMADSIDDLSKTLNELQQLRGTPATFRWHLSNAQTWVSAALTNDDTCLDGFGEDDGVGKLKSDVWRKVRNVARVTSNALYMINRLDDTHGRPRSKL* | 198 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pte10g01567 | 197 | CDD | PMEI-like_3 | 31 | 187 | - | - | |
| Pte10g01567 | 197 | FunFam | Pectinesterase inhibitor 3 | 24 | 187 | - | - | |
| Pte10g01567 | 197 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 24 | 188 | IPR035513 | - | |
| Pte10g01567 | 197 | PANTHER | PECTINESTERASE INHIBITOR-LIKE | 6 | 181 | - | - | |
| Pte10g01567 | 197 | Coils | Coil | 100 | 120 | - | - | |
| Pte10g01567 | 197 | SMART | PMEI_2 | 24 | 182 | IPR006501 | GO:0004857 | |
| Pte10g01567 | 197 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 26 | 186 | IPR035513 | - | |
| Pte10g01567 | 197 | Pfam | Plant invertase/pectin methylesterase inhibitor | 27 | 181 | IPR006501 | GO:0004857 | |
| Pte10g01567 | 197 | NCBIfam | pectinesterase inhibitor domain | 5 | 186 | IPR006501 | GO:0004857 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pte10g01567 | Pte-Chr10 | 34230268 | 34231167 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pte10g01567 | 28 | 189 | Carbohydrate Esterase | AT3G14310 | 31.288 | 5.91e-22 | 90.9 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pte10g01567 | - | - | qsa:O6P43_002628 | 236.113 |