Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01562 ATGTGCGACATGGATGAGGAAAGTTGTTACAGTCCTTCACAACCACCTGATGTTCCGAAAGGTTATTTGGCAGTTTACGTCGGCCGAGAGCTTAGGAGGTTCATCATTCCGACTACCTACCTCAGCCATTCACTTTTCAAAGTATTGCTGGATAAGACTGAGGAGTATGGGTTTGATCACAGTGGATTTGCAGCTGGACAGTCGCCTGCGTTCATGGAGTGA 222 0.473 MCDMDEESCYSPSQPPDVPKGYLAVYVGRELRRFIIPTTYLSHSLFKVLLDKTEEYGFDHSGFAAGQSPAFME* 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01562 73 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 11 62 IPR003676 GO:0009733
Pte10g01562 73 Pfam Auxin responsive protein 10 62 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01562 Pte-Chr10 34176044 34176666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01562 2 62 Calmodulin-binding Proteins AT3G43120 80.952 3.08e-30 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01562 K14488 - qsu:112019881 109.383