Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01548 ATGGCTTCCATAAACCTACAACTAGTTTTGCTCCTCTCAGTCTTCTTCTCAAGTGCATACAATGCTTCCACTGCTTCTGTAAATTCAAACCTATCCTCAATCAGATCTCTTTGTGAAACCACTCCCTACCCTTCTGTTTGCTTGGATTCATTGAAGCTATCCATCTCAGTCAATATCAGTCCAAATATCTTGAACTTTCTACTGCACACACTTGAAGTTGCAACATCTGAAGCTACAAAACTCTCTGGTCTCTTTACCAATGCTGGCCGCTCAAACATAATTGAGAATCAAAAAGGGACAGTCCAAGACTGTCAGGAACTGCACCAAATTACTCTCTCATCTTTGCAAAGATCTGTTTCAAAGGTTCGCAGTGCCAGCTCTAAACAACTTGCTGATGCCAGAGTCTACTTGAGTGCAGCTCTCACAAACAAGGCCACATGCTTGGAAGGTCTAGACTCCGCTTCAGGTCCCATGAAGCCAGTTCTTGTGAACTCCATTGTTGACACATACAAACATGTGAGCAATTCTCTTTCCATGCTCGCTAAGTCTAAACCTGGCATGAGAAAAACGAAGGGAAAGAAGAACAGGCGTTTGATGGGGTTCGTCCCAGAATGGTTTTCAAAGAGACATCGTCGGATCCTGCAGGGTGAAGGTGGAGATGAGTATGACCCCAGTGAAGGAATGACTGTTGCGGCTGATGGAACTGGAAACTTCACATCTATCATGGACGCAATAAACTTTGCACCAAATAACAGTTTTGACAGAACATTTATTTATGTTAAACAAGGGGTTTATGCAGAAAATGTGGAAATCCCAAGCTACAAGACCAACATTGTGCTACTTGGCGATGGAAGTGATGTCACTGTCATCACAGGAAGCAGAAGTGCCGCTGATGGTTGGACCACTTTCAGATCCGCCACTCTAGGTGAGTCCTTATCGCCTTGA 945 0.4402 MASINLQLVLLLSVFFSSAYNASTASVNSNLSSIRSLCETTPYPSVCLDSLKLSISVNISPNILNFLLHTLEVATSEATKLSGLFTNAGRSNIIENQKGTVQDCQELHQITLSSLQRSVSKVRSASSKQLADARVYLSAALTNKATCLEGLDSASGPMKPVLVNSIVDTYKHVSNSLSMLAKSKPGMRKTKGKKNRRLMGFVPEWFSKRHRRILQGEGGDEYDPSEGMTVAADGTGNFTSIMDAINFAPNNSFDRTFIYVKQGVYAENVEIPSYKTNIVLLGDGSDVTVITGSRSAADGWTTFRSATLGESLSP* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01548 314 FunFam Pectinesterase 30 182 - -
Pte10g01548 314 Pfam Plant invertase/pectin methylesterase inhibitor 33 179 IPR006501 GO:0004857
Pte10g01548 314 PANTHER PECTINESTERASE 15 309 - -
Pte10g01548 314 SUPERFAMILY Pectin lyase-like 228 308 IPR011050 -
Pte10g01548 314 Pfam Pectinesterase 228 309 IPR000070 GO:0030599|GO:0042545
Pte10g01548 314 SMART PMEI_2 29 179 IPR006501 GO:0004857
Pte10g01548 314 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 180 IPR035513 -
Pte10g01548 314 NCBIfam pectinesterase inhibitor domain 6 179 IPR006501 GO:0004857
Pte10g01548 314 CDD PMEI-like_3 36 182 - -
Pte10g01548 314 Gene3D - 223 311 IPR012334 -
Pte10g01548 314 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 182 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01548 Pte-Chr10 34048602 34049546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01548 16 311 Carbohydrate Esterase AT2G26440 60.726 5.98e-121 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01548 - - qsa:O6P43_021970 433.721