Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01544 ATGAAAGCCGTGGTTGAGTACTCTGAGGATGTTAATCCAGCGGTGAAGCAAGCAGCTGAGATGGAAAGCCACGACGCTTTGACTACTTCACAGCCTTCTATATATGGCAAAGCTGATCCCGGTGGCTCACAAGTTGTAAACTGTGTTGGGAAGGAAGAGTTGACTCCTCCAATGGATGTGATGGATGAAAAGAAACTTGTGGTGACTGAGGACTCAGTGGCGGACAAGTTAGTTCAGGACAAAGGGAATGATGAAAAAACACAGCCCTTCACAGCAACCAGGCCTGCAACAATGTCATCACTTGGAGTGAAGGGAGCTAAGAATCAACTCACCCTATTCTATGATGGGAAGGTCATCGTTTTTGAATCAATTCCTCCAGAAAAGGTGCAAGAAATTATGCTTATGGCTACTGCTGCTGCTGCGACTACTACTATAAAAGTTGCTGAAACAAACAATACTGACACTCAATCACTATCGGTTCCACCTGCTCCTACAAGTTTGCCTTCTCCACAAAGGAATGATGCTCTGGCTGCACTGCAGGCTCTGTGCCTTCCTTCTCAGAAAAGTTCCCTATACCAAATTCAAGAATTTCCAATTGCTAGGAGGCACTCTCTTCAGCGTTTTCTTGAAAAGCGAAGGGACAGGTTGGCAACCAAATCTCCATATGCTTCCCCATTAACAAAAAATGATGACAGCTTAGACAAAAACCTGGGGGCCAGCAAGTCACCAGATTCTGTGAACTTCAAACAATCTGAGGAAGAATTTGAACCAATTATAGTTGCTTCTTAA 789 0.4436 MKAVVEYSEDVNPAVKQAAEMESHDALTTSQPSIYGKADPGGSQVVNCVGKEELTPPMDVMDEKKLVVTEDSVADKLVQDKGNDEKTQPFTATRPATMSSLGVKGAKNQLTLFYDGKVIVFESIPPEKVQEIMLMATAAAATTTIKVAETNNTDTQSLSVPPAPTSLPSPQRNDALAALQALCLPSQKSSLYQIQEFPIARRHSLQRFLEKRRDRLATKSPYASPLTKNDDSLDKNLGASKSPDSVNFKQSEEEFEPIIVAS* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01544 262 ProSiteProfiles Tify domain profile. 103 138 IPR010399 -
Pte10g01544 262 MobiDBLite consensus disorder prediction 219 262 - -
Pte10g01544 262 MobiDBLite consensus disorder prediction 23 37 - -
Pte10g01544 262 Pfam tify domain 106 136 IPR010399 -
Pte10g01544 262 SMART tify_2 103 138 IPR010399 -
Pte10g01544 262 Pfam Jas motif 198 222 IPR018467 -
Pte10g01544 262 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 81 230 IPR040390 -
Pte10g01544 262 MobiDBLite consensus disorder prediction 222 246 - -
Pte10g01544 262 MobiDBLite consensus disorder prediction 19 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01544 Pte-Chr10 33998292 34001280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01544 108 222 Tify Gene Family AT5G20900 45.690 8.55e-23 90.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pte10g01544 tify 6.4e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01544 K13464 - qsa:O6P43_021963 164.081