Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01540 ATGGTTCACACATGGCATTATTGTCCCTGTGCATGGAGTAGGTTATTAAGGAATAGGGTCTCTGCTCAACAAGCCCGAGAGAGAAAGAAGGTATATGTCAATGATCTTGAATCACGAGCTACGGATTTGCATGACAGAAATGCCAAGCTAGAAAAGAGAATCTCTACTTTGATCAATGAGAACACTATGCTCCGTAAGGTTCTTTCGAACATAGCACCTAAGGTCGATGAAAGTAATGAGGTAAAGCAGCAGGATCAGTCAAGCAAATGCTGA 273 0.4212 MVHTWHYCPCAWSRLLRNRVSAQQARERKKVYVNDLESRATDLHDRNAKLEKRISTLINENTMLRKVLSNIAPKVDESNEVKQQDQSSKC* 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01540 90 SMART brlzneu 9 70 IPR004827 GO:0003700|GO:0006355
Pte10g01540 90 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 14 71 IPR004827 GO:0003700|GO:0006355
Pte10g01540 90 CDD bZIP_HY5-like 14 61 - -
Pte10g01540 90 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 14 87 IPR044280 GO:0000981|GO:0045944
Pte10g01540 90 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 14 28 IPR004827 GO:0003700|GO:0006355
Pte10g01540 90 FunFam Transcription factor HY5 29 70 - -
Pte10g01540 90 Gene3D Single helix bin 29 70 - -
Pte10g01540 90 Pfam bZIP transcription factor 14 66 IPR004827 GO:0003700|GO:0006355
Pte10g01540 90 Coils Coil 33 67 - -
Pte10g01540 90 SUPERFAMILY Leucine zipper domain 13 68 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01540 Pte-Chr10 33824783 33825155 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01540 11 78 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 69.118 3.09e-27 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte10g01540 bZIP_1 2.8e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01540 K16241 - aof:109831466 115.161