Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01538 ATGACAGAGACTCCGTGGTTGGTTTCTTTAGGGAGACTATTTGAAGGTGGCCTTGAGGCAGAGGAGAAGGAATTGAGAAGACGATCTATTATTGGCGAGATTTCACTAGAGGAGCAGCATCTGAGAATTGAGAATGCAAGGTTGAAGGATGAGCTGGACCGTGTTTGCGCACTTGCAGGCAAATTTTTGGGTCGTCCAATTTCTTCACTTTCTAACTCAATTGCTCAGTCATTGCCAAACTCAAGTTTGGAACTTGGAGTCGGGAATATTGGCTTTGGTGGTATGAGTACTGTAGCTACAACATTGCCTGCGGGACCTGATTTTGGTATTGGAATTTCAAATGGTTTACCTCTTGTGCCACCAACTAGACCATCAGCTGGGGCAACTGGTCTTGATAGATCAATTGAAAGGTCTATGTTTCTAGAGCTCGCATTGACAGCAATGGATGAATTGTTCAAAATGGCACAAACTGAAGAACCCCTTTGGATTAGGAGTCTAGATGGATTGGGAGGGGGAGGGCGAGAGAGAAACTGA 534 0.4494 MTETPWLVSLGRLFEGGLEAEEKELRRRSIIGEISLEEQHLRIENARLKDELDRVCALAGKFLGRPISSLSNSIAQSLPNSSLELGVGNIGFGGMSTVATTLPAGPDFGIGISNGLPLVPPTRPSAGATGLDRSIERSMFLELALTAMDELFKMAQTEEPLWIRSLDGLGGGGRERN* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01538 177 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 29 166 IPR042160 -
Pte10g01538 177 ProSiteProfiles START domain profile. 133 177 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01538 Pte-Chr10 33819698 33820597 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01538 29 168 Homeobox Transcription Factor Family AT4G00730 51.429 1.19e-31 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01538 K09338 - qsu:111991611 237.269