Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01524 ATGGTAAGAATAAGTAAGATTGCTCATGGAGGAATTTCGTTTCTCCTTGTCGTTGCTGTAGTTTTTGGTGTTACAGCTAATGCTTTCCTAAAGGATGACTCTGATATTCACATCATGACAACGTCTAAGGCTGTCACTGCAATGTGTGCTCAGACAGCCCACAAGAGCCATTGTTCTCGGAGCCTTGCATCTGTCGGAAACAATCACGGTGCCTCCTCAACTGATTACATCAAAGCTGCAATTGAGTCAGCCCTCAAAGCAGTCTCATCTGCCTTACATTTATCTGGTGATCTTGGCAAAAAGGCTGGTAAACCTAGACATAAGATGGCCATGGAAGATTGCCAAGACCTTTTGCAGTTTGCTGTTGATGAGTTGCAAGCATCATTTTCTTCTGTGGGAGATAGTAAACAACACACTTTGAATGACAGAGTAGATGAGCTGAAAAACTGGTTGAGTGCTGTCATATCCTACCAAGATACATGCCTTGATGGGGTTGAAGATAAACACTTGAAGAAAGAAATGTCAAATGGTCTTCTCAATGCAACACAGCTAACAAGCAACGCTTTGGCCATTGTTTCTAAGATCAATGGGATACTAAGTGACTTCGGCATTTCGATTGATTTAAATAAAAGGAAGCTTGATGAAACCCACGAACACAATATTGGTCAGCACCCTTCATGGATGTCCTCTACAGACAGGAAATTATTAGCACGTCAAAACCATGGTGCTGTTAAGCCTAATGCAGTCGTAGCGAAAGATGGAAGTGGACAATATAAAACAATCAATGCAGCTCTTGCAGCTTACCCGAAGAATCATAAAGGAAGATATGTAATCTATGTGAAAGCTGGCATATACAAAGAGCAAGTTTTGGTCGCGAAGAACCAGGCGAATGTGTTTATGTATGGAGATGGTCCTCGGAAGACAATAGTGACAGGAAGGTTGAACAACCGAGAGGGTACCTCGACATATCGAAGTGCATCATTTGCTGCTGTTGGACCTGGTTTCTTGTGCAAGTCAATGGGATTTGAGAACACAGCAGGACCTCAGGGACACCAAGCTGTGGCACTTCGTGTTCAATCAGACATGTCTGCCTTTTTCAACTGCAGAATGGACGGGTATCAGGACACATTGTACACCCAAACCCATCGTCAATTCTACCGCAACTGTGTCATCTCAGGGACAGTTGATTTCATCTTCGGAGATGCTGCAGCCGTCATCCAAAACTCTCAGATTATCGCGAGGATGCCTATGGCAAACCAAAAGAACACAATTACAGCTTCCGCGAGACTTGACAAAAATGAAGACACTGGCTTAGTCATCCAAAATTGCCAGATTGTTCCTGAGCAGAAACTCTTCCCTGCAAGGTTCAAGGTTCCTACCTACTTAGGTCGACCATGGAAGAAATATTCAAGGACCGTGTTCATGGAATCTACACTAGGGGATCTCATTAACCCAGCAGGATGGCTACCATGGGCTGGAAACTTCGCACTTGACACACTTTATTATGCAGAGTACAATAACGTAGGTCCAGGAGCTGCAACTGCTAAGAGGGTACACTGGAAGGGATACAAAGTCATCAAGAACAAGAATGAGGCACAGAAATTCACAGCTGGCCCATTTCTTAAAGCAAATACATGGGTTCCAGCCACAGCCGTGCCATTCTTCCCTGGTCTCAAAGCCTAA 1683 0.4409 MVRISKIAHGGISFLLVVAVVFGVTANAFLKDDSDIHIMTTSKAVTAMCAQTAHKSHCSRSLASVGNNHGASSTDYIKAAIESALKAVSSALHLSGDLGKKAGKPRHKMAMEDCQDLLQFAVDELQASFSSVGDSKQHTLNDRVDELKNWLSAVISYQDTCLDGVEDKHLKKEMSNGLLNATQLTSNALAIVSKINGILSDFGISIDLNKRKLDETHEHNIGQHPSWMSSTDRKLLARQNHGAVKPNAVVAKDGSGQYKTINAALAAYPKNHKGRYVIYVKAGIYKEQVLVAKNQANVFMYGDGPRKTIVTGRLNNREGTSTYRSASFAAVGPGFLCKSMGFENTAGPQGHQAVALRVQSDMSAFFNCRMDGYQDTLYTQTHRQFYRNCVISGTVDFIFGDAAAVIQNSQIIARMPMANQKNTITASARLDKNEDTGLVIQNCQIVPEQKLFPARFKVPTYLGRPWKKYSRTVFMESTLGDLINPAGWLPWAGNFALDTLYYAEYNNVGPGAATAKRVHWKGYKVIKNKNEAQKFTAGPFLKANTWVPATAVPFFPGLKA* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01524 560 SUPERFAMILY Pectin lyase-like 243 557 IPR011050 -
Pte10g01524 560 NCBIfam pectinesterase inhibitor domain 32 194 IPR006501 GO:0004857
Pte10g01524 560 ProSitePatterns Pectinesterase signature 2. 391 400 IPR033131 -
Pte10g01524 560 FunFam Pectinesterase 41 196 - -
Pte10g01524 560 Gene3D Invertase/pectin methylesterase inhibitor family protein 41 197 IPR035513 -
Pte10g01524 560 Pfam Pectinesterase 247 543 IPR000070 GO:0030599|GO:0042545
Pte10g01524 560 PANTHER PECTINESTERASE 16 548 - -
Pte10g01524 560 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 43 195 IPR035513 -
Pte10g01524 560 CDD PMEI-like_3 47 195 - -
Pte10g01524 560 FunFam Pectinesterase 241 558 - -
Pte10g01524 560 Gene3D - 241 558 IPR012334 -
Pte10g01524 560 SMART PMEI_2 40 191 IPR006501 GO:0004857
Pte10g01524 560 Pfam Plant invertase/pectin methylesterase inhibitor 44 191 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01524 Pte-Chr10 33540587 33542500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01524 43 558 Carbohydrate Esterase AT2G26450 46.050 1.06e-160 470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01524 K01051 - egr:104417569 731.48