Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01521 ATGTTTGTTTTCTTTTGTTTCGGAGGACTAACATTTCGTAGTTACTATACCACTTTTCTTCTTTCCTTCAGACATAAAATGGCATCTGATCTGAACCAAGGGCTGTCCAAAAAGACTTTCGTTTTTGGCTTGAAGTTGTGGGTGTTAATTGGATTAATTGTTGGATTATCTATCATAATAATTCTTGTGGTTCTATCAATATGCCTTACATCAAGAAAGAAATCCAGAAGAGGTAGTGGCATGCTTCGTCATACCCATATTTCAACTGTTCCTGAGGAAATTAAAGAGATCAGGATTGATCAAGTATCAGCTAGTCACTTTGGGCAAAATGGTGGTTTTGTTACTCTTGGTGACAAATTCAGTGATAAAGAGTCTGAAAAGGTCTTGATCCAAACAAAGAACGGGGATAATAGCAGTCAATCTGGTTTATTCAACCATTTAGAGAAAGATAACAATGATTCTCAATCAGGTGATGAAGGGCGTATCGGAACACTTTCTACTTATAGGTCTTCTGCGCATCCTATAACTGCTCCATCTCCTCTATCTGGTCTACCTGAGTTCTCTCACCTTGGTTGGGGTCATTGGTTTACTCTCAGGGACTTAGAACATGCGACAAACAGGTTTTCGAAAGAGAATATTATCGGTGAAGGTGGATATGGAGTTGTTTATCAAGGACGTCTAATCAATGGGACTCCTGTGGCTATCAAGAAGCTCTTGAATAATTTGGGACAAGCTGAGAAGGAATTCAGAGTAGAAGTTGAGGCTATAGGTCATGTGCGGCATAAGAACTTAGTTCGACTTTTGGGATACTGCGTTGAAGGCATCCACAGGTTGTTGGTATATGAGTATGTTAATAATGGAAATCTCGAACAGTGGCTTCACGGAGCTATGCGTCAGCATGGATATCTTACTTGGAATGCTCGAATGAAAATTCTCTCAGGCACAGCCAAGGCTCTGGCGTACCTTCATGAGGCAATAGAGCCGAAAGTCGTGCATCGAGACATTAAGTCAAGCAATATCTTGGTTGATGATGACTTTAATGCTAAAATATCTGACTTTGGGCTGGCTAAGTTGTTGGGTGCTGGAAAAAGTCATATTACCACTAGAGTAATGGGTACATTTGGATATGTGGCACCTGAATATGCCAATTCTGGGCTATTAAATGAGAAGAGTGATGTCTACAGTTTTGGGGTGCTGCTGTTGGAAGCAATTACTGGAAGAGACCCGGTGGATTACAGTCGGCCAGCACTTGAGGTAAATTTAGTGGACTGGCTCAAGATGATGGTAGGAAGTAGGCGCTCTGAAGAGGTGGTGGATCCAAATATTGAGGTTAGGCCATCTACAAGTGCACTGAAAAGAGCTCTTTTGACTGCTTTGAGATGTGTAGATCCAGATGCTGATAAAAGACCAAAGATGGGGCAAGTTGTCCGTATGCTTGAAATGGAAGAATACCCCATCCCTCGAGAGGACCGAAGACGTAGAAGAAGTCAGGCAGGAAATGCAGATGCAGAGTCTCAAAGGGATAACTCTGATATAGATAAGCGTGATAATCCAGTTTCTAAATCTAATGACAGGACAAAGCAGAGAGAATAG 1593 0.4156 MFVFFCFGGLTFRSYYTTFLLSFRHKMASDLNQGLSKKTFVFGLKLWVLIGLIVGLSIIIILVVLSICLTSRKKSRRGSGMLRHTHISTVPEEIKEIRIDQVSASHFGQNGGFVTLGDKFSDKESEKVLIQTKNGDNSSQSGLFNHLEKDNNDSQSGDEGRIGTLSTYRSSAHPITAPSPLSGLPEFSHLGWGHWFTLRDLEHATNRFSKENIIGEGGYGVVYQGRLINGTPVAIKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCVEGIHRLLVYEYVNNGNLEQWLHGAMRQHGYLTWNARMKILSGTAKALAYLHEAIEPKVVHRDIKSSNILVDDDFNAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVLLLEAITGRDPVDYSRPALEVNLVDWLKMMVGSRRSEEVVDPNIEVRPSTSALKRALLTALRCVDPDADKRPKMGQVVRMLEMEEYPIPREDRRRRRSQAGNADAESQRDNSDIDKRDNPVSKSNDRTKQRE* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01521 530 SMART serkin_6 208 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g01521 530 Gene3D Transferase(Phosphotransferase) domain 1 284 494 - -
Pte10g01521 530 ProSitePatterns Serine/Threonine protein kinases active-site signature. 330 342 IPR008271 GO:0004672|GO:0006468
Pte10g01521 530 Gene3D Phosphorylase Kinase; domain 1 190 283 - -
Pte10g01521 530 MobiDBLite consensus disorder prediction 472 530 - -
Pte10g01521 530 ProSitePatterns Protein kinases ATP-binding region signature. 214 237 IPR017441 GO:0005524
Pte10g01521 530 FunFam Putative receptor-like serine/threonine-protein kinase 284 495 - -
Pte10g01521 530 ProSiteProfiles Protein kinase domain profile. 208 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g01521 530 MobiDBLite consensus disorder prediction 131 150 - -
Pte10g01521 530 FunFam Putative receptor-like protein kinase 190 283 - -
Pte10g01521 530 PANTHER OS01G0323000 PROTEIN 30 506 - -
Pte10g01521 530 SUPERFAMILY Protein kinase-like (PK-like) 192 487 IPR011009 -
Pte10g01521 530 CDD STKc_IRAK 214 480 - -
Pte10g01521 530 Pfam Protein kinase domain 209 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g01521 530 MobiDBLite consensus disorder prediction 127 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01521 Pte-Chr10 33497761 33501901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01521 53 482 Trihelix Transcription Factor Family AT1G70460 40.920 1.25e-90 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Pte10g01521 Pkinase 8.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01521 - - gmx:732653 798.505