Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01520 ATGGGCCTTTTTAACTGTTGCGATGGAAGTGACCTTCAAAATGATGTTTTTCAAGCTCACATGACTGCAAATAAACCTGGTGGGAATAGTGGAAATTATCATATCAAAGAACCTGCAAAAAGGGAGTCACAAACTATAAATTTTCAACCAGTTTCTGTACCTGCCATTACAGCAGATGAATTGAAGGATCTTACAGGTAATTTTGGCACCAAAGCTTTGATTGGTGAAGGTGCGTATGGTAAAGTGTACCGTAGTGTTTTGAAGAGTGGGCGTGATGCAGCAATCAAGAAGCTAGATGACAACAAGCAGCCAGAAAGAGAATTTCTTGCACAGGTTTCCATGGTGTCAAGACTGAAACATGAGCATGTCGTCGAGCTTCTTGGCTACTGTGTGGATGGCCCTCTTCGTGTCCTCGCCTATGAATATGCTTCTCATGGCTCTCTTCATGATAATATCCATGGACGCAAAGGCGTCAAAGGAGCAGCTCCAAGTACGGTCCTATCATGGGGACAAAGAGTTAAAATTGCTGTTGGTGCTGCTAAAGGACTTGAATATCTTCACGACAAAGCCGAGCCTCGGATTGTTCACCGTTACATCAAGTCCAGCAACATACTACTGTTTGATGATGATGTTGCCAAAATTGCTGATTTTGATTTGTCAAACGAATCCCCTGACATGGCAGCACGCCTTCATTCAACTCGTGTTCTGGGTACCTTTGGCTACCATGCTCCAGAGTACGCAATGACAGGACAAATGACTGCAAAAAGTGATGTCTACAGCTTTGGAGTTGTCCTGCTGGAAATCTTAGCTGGTCGTAAACCCGTTGATCACACCTTGCCGCGTGGAGAGCAGAGTCTTGTAACTTGGGCAACACCGAAACTCAGCGAAGATAAGGTGAAGCAATGTGTCGATCCGAGGCTGAATGGAGAATACCCACCTAAGGCAGTTGCAAAGGTAGCCAAAAAACTTCTGTATATTTTTTGTGTGATGATTGATGGTAATTGGAACTCGGGTTTATTGTTTCATGCGTTTAATGTTGTAATTTTGGTGTATGCTGAGAATGCAGCTTGCTGCCGTTGCTGCATTGTGCCTGCAATATGA 1101 0.4396 MGLFNCCDGSDLQNDVFQAHMTANKPGGNSGNYHIKEPAKRESQTINFQPVSVPAITADELKDLTGNFGTKALIGEGAYGKVYRSVLKSGRDAAIKKLDDNKQPEREFLAQVSMVSRLKHEHVVELLGYCVDGPLRVLAYEYASHGSLHDNIHGRKGVKGAAPSTVLSWGQRVKIAVGAAKGLEYLHDKAEPRIVHRYIKSSNILLFDDDVAKIADFDLSNESPDMAARLHSTRVLGTFGYHAPEYAMTGQMTAKSDVYSFGVVLLEILAGRKPVDHTLPRGEQSLVTWATPKLSEDKVKQCVDPRLNGEYPPKAVAKVAKKLLYIFCVMIDGNWNSGLLFHAFNVVILVYAENAACCRCCIVPAI* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01520 366 Gene3D Transferase(Phosphotransferase) domain 1 144 332 - -
Pte10g01520 366 Pfam Protein tyrosine and serine/threonine kinase 72 277 IPR001245 GO:0004672|GO:0006468
Pte10g01520 366 SUPERFAMILY Protein kinase-like (PK-like) 43 325 IPR011009 -
Pte10g01520 366 FunFam pto-interacting protein 1 144 350 - -
Pte10g01520 366 ProSitePatterns Protein kinases ATP-binding region signature. 74 97 IPR017441 GO:0005524
Pte10g01520 366 ProSiteProfiles Protein kinase domain profile. 68 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g01520 366 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 4 321 - -
Pte10g01520 366 Gene3D Phosphorylase Kinase; domain 1 29 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01520 Pte-Chr10 33494427 33496650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01520 60 316 Glycoside Hydrolase AT3G07070 48.659 5.44e-76 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Pte10g01520 PK_Tyr_Ser-Thr 6.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01520 K13436 - sly:544006 488.804