Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01516 ATGGTTGATGTTACAAAGCTTGGAGCTGAAGAAAGACGCTTGTTCATTGAAAAGCTTATAAAGGATATTGAGAATGATAATCTCCAGCTTCTGTTGAAGTTAAGAGAGAGATTAGACAGAGTAAATTTGAAATTGCCTACAGTAGAGGTGAGGTACAAGAATCTTCAAGTGGAGGCAGAGTGCGAGGTTGTTGAAGGAAAGCCACTTCCTACTTTATGGAACTCACTACTGAGCTTCTTTTCAGGCTTTCCCGGAATGATGTCATGTAAATCTCAAGAAGCTAAAATAAGCATTTTAAAAGATGTCAGTGGTATTATAAAACCATCGAGGCTTACTCTGCTACTTGGTCCACCTGGATCTGGGAAAACCACTCTTTTGCAGGCTCTAGCAGGAAAAGCAAAGAAATCTCTCAAGGTGTCAGGGGAAATCTCTTGCAATGGGTACTCTCTAGATGAGTTTGTTCCTCAAACAACATCAGCCTATATAAGTCAACATGACTTGCACGTACCTGATATGACTGTAAGGGAGACAATCGACTTTTCTGCGCGTTGTCAGGGTGTTGGAAGTAGAGCTGATATCATGGCTGAAGTCTGCAGATTAGAGAAGGAAACAGGAATAATCCCTGATCCAGATATTGATACCTATATGAAAGCAATTTCAGTCAAGGGGAAAACAAGAAGCCTGCAAACTGATTATATATTGAAGATCCTTGGACTGGATATATGCGCTGATGTAATTGTAGGAAATGCAATGAAAAGAGGCATTTCTGGTGGGCAAAAGAAACGCTTAACTACAGGAGAGATGATGGTTGGTCCCAAAAGCACTTTCTTTATGGATGAAATATCAACTGGCTTGGATAGCTCCACAACTTTTCAGATTGTTAGATGTCTTCAGCATTCGGTGCACATCACTGGTGCAACTGCATTGATTTCCCTACTTCAGCCACAACCTGAAACCTTTGATCTATTTGACGATCTAATACTAATGGCAGAGGGGAAAGTAGTCTACCATGGCCCATGCAGTGAAGCACTTCAATTTTTCCAAGACTGTGGCTTCCGGTGTCCAGAGAGAAAAGGTGTGGCAGACTTCCTTCAGGAGGTGATTTCCAAGAAGGATCAAGGGCAGTACTGGTACCATACAGACCTTCCCTATAGCTATATATCCGTGGATCAATTATCACATTTTTTCAGATTAAGTTACTGGGGACAGAAACTACAAGATGAACTTTCACTGCCTTATGATAAATCTCCATCACAAAACAATGCACTATCATTCAGAAAATACTCCTTGAGTAAATGGGAATTATTCAAAGCATGCATGGCAAGAGAGCTACTTCTCATGAAACAGAATTCCTCTATCTATGTATTCAAGACAGCACAGGTAGTCTTCACTGGCAGCATAACGATGACAGTATTTGCTGGAAGTCATAAGGATGTGAACTATTCAAGGGCTAGTTTTCTGATGGGGTCTTTGTATTATACACTAATCCGTTTTTTCACCAGTGGCATTCCTGAGCTAAGCCTGACCATTATGAGACTCCCTGTAGTTTATAAGCACAAGGACTTTTACCTATACCCTATCTGGGCTTATTCTATTCCAGCAGCAATTCTGAAAATACCTTTGTCCATCACAGATGCTTTACTATGGACTACGATAACATATTATGTAATTGGATATAGCCCTGAGGTAGACAGGTTCTTTCGACAGCTTCTCCTACTGTTTGTTCTTCATCTATCGTCAACGTCAATGTACCGTCTCGTAGCCTCAGTTTTCCAAAATGTAATAATTGCAACTACAGTCAGTTCTTTGATGATGTTATCAATGTTCTTGTTTGGAGGTTTCATCATTCCCAGACCTTCTTTACCATTGTGGCTAAGGTGGGGTTTCTGGCTTTCTCCAATGACCTATGGAGAGATTGCATTAACAACAAATGAATTTCTGGCTCCTCACTGGCAAAGGGTTGAGGAGGAAAATGTGACCATGGGAAGAGATATTTTAAGAAGACACGGTTTAGACTTCAGTGAACACTATTACTGGATATCTATTGCAGCATTGCTTGGATTTATTTTATTTTTCAATCTAGGTTTTATATTAGCTCTCACTTACTTAAATCCTCAAAAGATGTCCAGAGCTATTGTCACAAAGAAGAGGTTCTCACAACTGCAGGGTGATAATTACGAGAATGTGGAACTAGAAAACCAATCAACAAAAATCGAAATTAATCAAAGTACTGCAGAAGAAGGCAAAATGATCCTACCCTTTGAGCCTTTGACAATGGTGTTTAAGGATGTGCAGTATTTTGTTGATAACTCCCTGAAAATGAAAGGGCGCGGTTTCAATAAGAAGAAAGTTCAGTTGCTGCACAACGTTACAGGCGCATTTAGGCCAGGAGTCCTTACAGCACTTATGGGAGTTAGTGGAGCAGGGAAAACTACTCTCATGGATGTTCTTTCAGGGAGGAAAACTGTAGGTGTTATACAAGGAGATATAAGAATAGGAGGATACCCCAAAGTGCAGAAGACGTTTGCTAGAATCTCAGGCTACTGTGAGCAAAATGATTTACACTCTCCTTACTGTACAGTTGAAGAATCGATGGAGTTTTCTGCATGGATGCGTTTACCTCCTGAAGTTGATCCATTCACAAAAATGAAATTCGTGGAAGAAGTTATTGAGACAATTGAACTGAATCACATAAAGGATGCTTTGGTTGGCTTTCCTGGAAAAAGTGGTCTGTCAACTGAGCAGCGTAAAAGACTAACAATTGCAGTGGAGCTTGTTTCCAATCCATCCATACTCTTCATGGATGAACCTACCTCAGGTTTAGATGCCAGAGCAGCTGCAGTGGTCATGCGTGCCGTGAGGAATATTGTTTCCACAGGCAGAACAACGGTCTGCACCATACACCAACCAAACATTGATGTATTTGAAACTTTTGATGAGCTGTTTCTGATGAAAAAGGGAGGACGGATTGTCTATACTGGAAAGATTGGCCATCACTCAAGTAAACTAATTGAATATTTTGAGAGTATACCTGGAGTACCAAAGATCAAACATAATTGTAACCCAGCAACATGGTTGATGGAAGTTACTTCTTCATCTGTAGAAGCAGAACTTGGCATAGACTATGCTGACATCTACAGAGATTCACCTCTATATCGGGATACCCTTGAGTTGGTGAGTGAGTTAAGTGAACCAAAGCCAGGTTCGAAAGATTTGCACTTCCCCACTAGTTTTCCACGAAATGGCTGGGTGCAGTTGACTGCATGCCTTTGGAAACAAGGGTTATCCTATTGGAGAAGTCCTGAATACAACTTAACACGTTATGCATTTATTACTGTTGCTTCTGTAATATTTGGTTTAGTATTTTGGCAGAAAGGGAAAGAAATAAACAATGAGCAGGATCTGTTCAACGCATTTGGATTGATGCACACTGCAGTCATATTCTTGGGCATAAAGAACTTGACTTCAATTCTACCGTACGTCTCAACTGAGCGCACCGTTTTGTACAGGGAAAAATTTGCAGGAATGTATTCTGCAAAAGCTTCTGCATTTGCTCAGGTGGCCATTGAAGTACCATACACCTTGTTACAAGCTTTTATATATGTGATTATTACATATCCAGCAATTGGTTATGACTGGTCTGTGTACAAGTTCTTATGGTACTTCTATGCAACGTTTTGTACCTTCTTGTACTTTGTGTACCTTGGGATGTTAATAACTTCATTGACCCCAAATCTTGAAGTAGCATCCATACTGTCAGTTCCAGTGTACACCCTAATGAATCTCTTCTCAGGATTCCTCATGCCAGGACCGAACATTCCTAAATGGTGGGTTTGGTGTTATTGGATTTCACCAACATCATGGTCCTTAGATGGTTTCCTAACTTCACAATATGGAGACGTCAACAAAGAGATTTTAATATTTGGAGACCGCAAGACAGTGTCTGCGTTTCTACGAGATTACTATGGATTCCGTCATGATCGTCTGAGCATTGTAGCTGTTGGTCTCATTGCTTTTCCAATTGCCTATGCTTTGTTATTTGCATACTGCATAGGGAAATTGAATTTCCAGAATAGGTGA 4080 0.4042 MVDVTKLGAEERRLFIEKLIKDIENDNLQLLLKLRERLDRVNLKLPTVEVRYKNLQVEAECEVVEGKPLPTLWNSLLSFFSGFPGMMSCKSQEAKISILKDVSGIIKPSRLTLLLGPPGSGKTTLLQALAGKAKKSLKVSGEISCNGYSLDEFVPQTTSAYISQHDLHVPDMTVRETIDFSARCQGVGSRADIMAEVCRLEKETGIIPDPDIDTYMKAISVKGKTRSLQTDYILKILGLDICADVIVGNAMKRGISGGQKKRLTTGEMMVGPKSTFFMDEISTGLDSSTTFQIVRCLQHSVHITGATALISLLQPQPETFDLFDDLILMAEGKVVYHGPCSEALQFFQDCGFRCPERKGVADFLQEVISKKDQGQYWYHTDLPYSYISVDQLSHFFRLSYWGQKLQDELSLPYDKSPSQNNALSFRKYSLSKWELFKACMARELLLMKQNSSIYVFKTAQVVFTGSITMTVFAGSHKDVNYSRASFLMGSLYYTLIRFFTSGIPELSLTIMRLPVVYKHKDFYLYPIWAYSIPAAILKIPLSITDALLWTTITYYVIGYSPEVDRFFRQLLLLFVLHLSSTSMYRLVASVFQNVIIATTVSSLMMLSMFLFGGFIIPRPSLPLWLRWGFWLSPMTYGEIALTTNEFLAPHWQRVEEENVTMGRDILRRHGLDFSEHYYWISIAALLGFILFFNLGFILALTYLNPQKMSRAIVTKKRFSQLQGDNYENVELENQSTKIEINQSTAEEGKMILPFEPLTMVFKDVQYFVDNSLKMKGRGFNKKKVQLLHNVTGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTVGVIQGDIRIGGYPKVQKTFARISGYCEQNDLHSPYCTVEESMEFSAWMRLPPEVDPFTKMKFVEEVIETIELNHIKDALVGFPGKSGLSTEQRKRLTIAVELVSNPSILFMDEPTSGLDARAAAVVMRAVRNIVSTGRTTVCTIHQPNIDVFETFDELFLMKKGGRIVYTGKIGHHSSKLIEYFESIPGVPKIKHNCNPATWLMEVTSSSVEAELGIDYADIYRDSPLYRDTLELVSELSEPKPGSKDLHFPTSFPRNGWVQLTACLWKQGLSYWRSPEYNLTRYAFITVASVIFGLVFWQKGKEINNEQDLFNAFGLMHTAVIFLGIKNLTSILPYVSTERTVLYREKFAGMYSAKASAFAQVAIEVPYTLLQAFIYVIITYPAIGYDWSVYKFLWYFYATFCTFLYFVYLGMLITSLTPNLEVASILSVPVYTLMNLFSGFLMPGPNIPKWWVWCYWISPTSWSLDGFLTSQYGDVNKEILIFGDRKTVSAFLRDYYGFRHDRLSIVAVGLIAFPIAYALLFAYCIGKLNFQNR* 1360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01516 1359 Pfam ABC transporter 787 939 IPR003439 GO:0005524
Pte10g01516 1359 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 72 356 IPR003439 GO:0005524
Pte10g01516 1359 CDD ABCG_PDR_domain1 78 338 IPR034001 -
Pte10g01516 1359 Gene3D - 770 1007 IPR027417 -
Pte10g01516 1359 Gene3D - 87 349 IPR027417 -
Pte10g01516 1359 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 772 998 IPR027417 -
Pte10g01516 1359 Pfam Plant PDR ABC transporter associated 651 713 IPR013581 -
Pte10g01516 1359 Pfam ABC-2 type transporter 314 385 IPR043926 GO:0140359
Pte10g01516 1359 Pfam ABC-2 type transporter 968 1035 IPR043926 GO:0140359
Pte10g01516 1359 Pfam ABC-2 type transporter 435 646 IPR013525 GO:0016020|GO:0140359
Pte10g01516 1359 Pfam ABC-2 type transporter 1085 1297 IPR013525 GO:0016020|GO:0140359
Pte10g01516 1359 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 96 355 IPR027417 -
Pte10g01516 1359 Pfam ABC transporter 99 280 IPR003439 GO:0005524
Pte10g01516 1359 FunFam ABC transporter G family member 34 86 390 - -
Pte10g01516 1359 FunFam ABC transporter G family member 34 773 1005 - -
Pte10g01516 1359 Coils Coil 726 746 - -
Pte10g01516 1359 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 2 1359 - -
Pte10g01516 1359 SMART AAA_5 796 988 IPR003593 GO:0016887
Pte10g01516 1359 SMART AAA_5 108 341 IPR003593 GO:0016887
Pte10g01516 1359 CDD ABCG_PDR_domain2 756 994 IPR034003 -
Pte10g01516 1359 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 772 1012 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01516 Pte-Chr10 33463042 33471101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01516 780 993 Calmodulin-binding Proteins AT2G36910 25.322 2.99e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01516 K08711 - jre:109013042 1985.69