Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01507 ATGGAGGCAAAGATGAAGATCAATCGTTCTGGATACATCATGAAAATAGATGATGATGCTTTCGTTAAGATCGATGAGTTTCTGTCTAGCCTCAACGGAGCCAGAGTTCAGTGTGGGCTAAAGGGTTCACTTTGTCGCGATACTCGGCGAATTGGGACAGTGAAGTATGTGGGAATCATTGACTGCTACTCGGGTACATGGGTGGGAGTGGACTGCGACAATGGCGAAGCCAAACATGATGGGTCTGTTAATGGGGTCCGATATTTTGAGAGACCATTAAAAGATTCTATTTTTGAGACTTCTTTGGTTAATTTTGTCCCCAACATTCGCTCTGGGAGCTATGCTGACATTTTTATAGATAATCTTGCTGCTCATCTTGGATCCCTGTACAAGTGTCCGACTCCTAGTGGCTTCTATGCAGTTTTCGAAGGTCATGGAGGGCCTGAGGCAGCTGCTTTTATTAAAAGGAATGCTTTGAAACAGTTCTTTGGCAATGCTGGTCCGCCGCAAACATATGATTCTGATATTAGTTTCTTGAAAGAGTTAGAAATCTCTCATAGAAGAGCATTTTTGCTGGCAGATCTTGCCCTGGCCAATGAACAAAGTGTGACTGGTTCCTGCGGTACAATTGCTCTAATTGCAATTATACCTGGAAGGCATTTGCTAGTTGCAAATGCTGGTGACTGTAGAGCTGTTCTCTGCCAGAGGGGAATGGCTGTGGTGATGTCTCAAGATCATCGACTTTCCTACCTGGGAGGTTTTGTTGATGATGGCTATTTGAATGGTTATCTTTCAGTTACTCGAGCTCTTGGGGACTGGGACTTGAAATTCCCCCGTGGCTTTTAA 846 0.4433 MEAKMKINRSGYIMKIDDDAFVKIDEFLSSLNGARVQCGLKGSLCRDTRRIGTVKYVGIIDCYSGTWVGVDCDNGEAKHDGSVNGVRYFERPLKDSIFETSLVNFVPNIRSGSYADIFIDNLAAHLGSLYKCPTPSGFYAVFEGHGGPEAAAFIKRNALKQFFGNAGPPQTYDSDISFLKELEISHRRAFLLADLALANEQSVTGSCGTIALIAIIPGRHLLVANAGDCRAVLCQRGMAVVMSQDHRLSYLGGFVDDGYLNGYLSVTRALGDWDLKFPRGF* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01507 281 SMART PP2C_4 100 280 IPR001932 -
Pte10g01507 281 CDD PP2Cc 124 278 IPR001932 -
Pte10g01507 281 ProSiteProfiles CAP-Gly domain profile. 58 120 IPR000938 -
Pte10g01507 281 PANTHER PROTEIN PHOSPHATASE 2C 111 276 IPR015655 GO:0004722|GO:0006470
Pte10g01507 281 Gene3D - 31 103 IPR036859 -
Pte10g01507 281 Gene3D - 115 280 IPR036457 -
Pte10g01507 281 SUPERFAMILY Cap-Gly domain 42 98 IPR036859 -
Pte10g01507 281 Pfam Protein phosphatase 2C 132 276 IPR001932 -
Pte10g01507 281 Pfam CAP-Gly domain 47 98 IPR000938 -
Pte10g01507 281 SUPERFAMILY PP2C-like 133 276 IPR036457 -
Pte10g01507 281 SMART CAP_GLY_2 41 96 IPR000938 -
Pte10g01507 281 ProSiteProfiles PPM-type phosphatase domain profile. 110 281 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01507 Pte-Chr10 33362845 33367628 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01507 101 278 PP2C-type Phosphatase Gene Family AT1G48040 58.291 2.65e-68 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Pte10g01507 PP2C 3.2e-23 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01507 K14803 - gmx:100775577 264.233