Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01502 ATGCTTGGAGTCAAGATGTCCATATTTGAATTAGTTTTAGACAGAAATCCTTGTTCTCTTTTCTTCTTCCTATGTTTCTTAACCTTTGCTTTCGTATCATTTATCAAAGCATCTGAGATAACAGTGGCATCCCACGAATCTGACAGAATAGTTAATCTTCCTGGCCAACCCTCAGCACCATTAATCTCACAGTTTTCAGGTTACATCACTGTCAATCAAGAAAATGGGAGAGCCCTTTTCTACTGGTTCTTTGAAGCTCAATCTCAGCCATCCAAGAAGCCTCTCCTACTCTGGTTAAATGGAGGGCCTGGATGTTCCTCAATTGGATATGGTGCAGCTGTGGAGATAGGACCTCTTCTAGTCAACGAAAATGGGGACGGACTACATTTCAACACATACTCTTGGTATCAAGAAGCCAATTTGTTATTTGTGGAGTCTCCCGTTGGAGTTGGTTTCTCTTACTCGAACACATCTTCTGATTTAACCATGTTAGATGACAATTTTGTTGCTGAAGACGCTTACAACTTCTTGGTAAATTGGCTGCAAAAATTCCCACAGTATAACTCCTCTGATTTCTTTATTTCTGGAGAGAGTTATGCTGGGCACTATATTCCTCAGTTGGCAGAGCTTGTCTTTGACAGAAACAAGCAAAGACCCAAGAACCTATTCATCAATCTAAAAGGATTTATAGTAGGGAATCCAGAAACTAATGATTACTATGACAACAAAGCCCTCTTGGAATATGCATGGAGCCACTCAGTTATATCAGATCAGCTCTATGAAAAAGGGGAACAAGTATGTGATTTCAAGAAATCTAATTGGTCTAAAGATTGCGACGATGTCATGGTAGACGTCTTTCGAGAATATACTGAGATTGATATCTACAACATTTATGGCCCGGTTTGTCGATTGAATAGCAGTTCATCTATATCTGATAATGATTATACTAATGATGTCAAATCACCAAGTAAGTTGAGAATCAACTCTAGACTGAGGATGATGAGAATGTTTGGAGGCTACGATCCATGTTATTCGAAAGATGCAGAAAAATACTTCAATAAGATAGATGTCCGGAGATCTATGCATGCAGCTGTTGAAGGAGTTAACACCGGTGCGCAATGGATAACATGCAATAGCTCAATCTTAAGGACATACAATGTCACAGTTTTCTCCATGCTGCCTGCTTACACTAAACTTATCAAGGGCGGGCTTAAAATATGGATATACAGTGGGGATGCAGATGGTAGGGTACCAACGATAGGATCACGCTACTGCGTAGAGGCTCTTGGGTTACCTCCCAAAGCGGCCTGGCATCCTTGGTACCACAACGATCAGGTTGGTGGGAGGATAGTAGAGTATGAAGGGCTAACATTTGTGACAGTAAGAGGAGCAGGGCATTTGGTACCTCGGGACAGGCCCAGTGAGGCTCTTGCCCTCATTCATTCTTTCCTCACCGGAGAAAATCTCCCTACTCGACGATAA 1482 0.4163 MLGVKMSIFELVLDRNPCSLFFFLCFLTFAFVSFIKASEITVASHESDRIVNLPGQPSAPLISQFSGYITVNQENGRALFYWFFEAQSQPSKKPLLLWLNGGPGCSSIGYGAAVEIGPLLVNENGDGLHFNTYSWYQEANLLFVESPVGVGFSYSNTSSDLTMLDDNFVAEDAYNFLVNWLQKFPQYNSSDFFISGESYAGHYIPQLAELVFDRNKQRPKNLFINLKGFIVGNPETNDYYDNKALLEYAWSHSVISDQLYEKGEQVCDFKKSNWSKDCDDVMVDVFREYTEIDIYNIYGPVCRLNSSSSISDNDYTNDVKSPSKLRINSRLRMMRMFGGYDPCYSKDAEKYFNKIDVRRSMHAAVEGVNTGAQWITCNSSILRTYNVTVFSMLPAYTKLIKGGLKIWIYSGDADGRVPTIGSRYCVEALGLPPKAAWHPWYHNDQVGGRIVEYEGLTFVTVRGAGHLVPRDRPSEALALIHSFLTGENLPTRR* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01502 493 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 50 473 IPR001563 GO:0004185|GO:0006508
Pte10g01502 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 180 205 IPR001563 GO:0004185|GO:0006508
Pte10g01502 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 143 IPR001563 GO:0004185|GO:0006508
Pte10g01502 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 144 154 IPR001563 GO:0004185|GO:0006508
Pte10g01502 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 456 469 IPR001563 GO:0004185|GO:0006508
Pte10g01502 493 Gene3D alpha/beta hydrolase 44 304 IPR029058 -
Pte10g01502 493 FunFam Carboxypeptidase 392 486 - -
Pte10g01502 493 SUPERFAMILY alpha/beta-Hydrolases 45 489 IPR029058 -
Pte10g01502 493 Gene3D - 343 381 - -
Pte10g01502 493 Pfam Serine carboxypeptidase 57 485 IPR001563 GO:0004185|GO:0006508
Pte10g01502 493 ProSitePatterns Serine carboxypeptidases, histidine active site. 456 473 IPR033124 GO:0004185
Pte10g01502 493 FunFam Carboxypeptidase 44 304 - -
Pte10g01502 493 Gene3D - 392 486 - -
Pte10g01502 493 ProSitePatterns Serine carboxypeptidases, serine active site. 194 201 IPR018202 GO:0004185
Pte10g01502 493 FunFam Carboxypeptidase 340 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01502 Pte-Chr10 33321275 33324258 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01502 372 489 Calmodulin-binding Proteins AT2G22960 30.252 6.23e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01502 K16297 - gmx:100792930 718.383