Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01489 ATGGCGTCATCTCTGATCTCAAACCCTATCAATAATCCTGATCGGTCACGTGACAAGAGGAAGAAGAAGAAGAAAGACACCCAAGCTAAACAAATGCAACAACAACAATTACAGCAGCAGCAGAACAGCTACATCAGATGGAAATCTCAAACACAACAACAACTCTACTCTTCGAAGCTTCTTCAAGCTCTCAGCCAAGTCAGCGTTCGTTCTTCTACACCACCCGCTGCAACAACAACCAGCAACATCCATACAATCAATAATAACAATCGAAATGAATCGGTTCCTCGTGGCGGCAGAGCTGTAAGAGAAGCCGCCGACAGAGTCTTAGCGGTGGCTGCTAAGGGGAGGACTAGGTGGAGCAGTGCCATTCTCACCAATCGGCTTAAGCTCAAGTTCAGGAAACACAAGAAGCAGAGGATGACTCCAAGCGAGAGCAGCCGGTCTAAGAAGCCCAGGTTCAGCGTTTTGCGATTGAAGGGAAAGTGTCAACCGGCTCTGCAGAGAAAAGTGAGGCTTCTTGGCCGGTTGGTTCCCGGTTGCCGGAAAGAACCCTTGCCTGTCATATTGGAGGAGGCCACTGATTACATAGCAGCGCTGGAGATGCAGGTTCGAGCCATGAGCGCTCTGGCTGAGTTGCTCTCTGGGTCTAGCTCCGGTGGCGACTCTACTTCTGCGCCGCCTAGTTAA 690 0.5043 MASSLISNPINNPDRSRDKRKKKKKDTQAKQMQQQQLQQQQNSYIRWKSQTQQQLYSSKLLQALSQVSVRSSTPPAATTTSNIHTINNNNRNESVPRGGRAVREAADRVLAVAAKGRTRWSSAILTNRLKLKFRKHKKQRMTPSESSRSKKPRFSVLRLKGKCQPALQRKVRLLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAMSALAELLSGSSSGGDSTSAPPS* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01489 229 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 170 215 IPR036638 GO:0046983
Pte10g01489 229 MobiDBLite consensus disorder prediction 72 95 - -
Pte10g01489 229 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 48 214 IPR044660 GO:0006355
Pte10g01489 229 CDD bHLH_AtIBH1_like 156 211 IPR044549 GO:0006355
Pte10g01489 229 MobiDBLite consensus disorder prediction 72 99 - -
Pte10g01489 229 MobiDBLite consensus disorder prediction 1 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01489 Pte-Chr10 33232728 33234224 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01489 46 210 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 51.744 4.83e-53 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01489 - - qsa:O6P43_021878 220.32