Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01486 ATGGATTCACGAACTAGACATATAATAACTGCATTTCTTCTTGTTAATGCCGTTGTTGTCAAGGGAGGAGGTCTCAATTTTAATTTCTATGAGCAAACATGCCCAAATGTAGAAGACATCATAAGAATTGGCATCAAACCTTGGTTAGTGGATCCCTCTACACCAGCTGCGTTGCTGAGACTCCTGTTTCATGACTGCCAAGTTCAGGCCTGTGATGCTTCCATCCTAATTGATTCTAACAATGCAACTGCACCATCTGAGTTGGCCTCAGACTTCAACTTCGGAATCCGGAAGAGGGAATTGATTGATGCTCTCAAATCAATGGTCGAAGCACAGTGCCCGTCGCAAGTCTCTTGCTCTGATATCCTCATACTTGCTGCACGTGAGGCCGTAGACATATCTGGGGGTCCAAGAATCAACGTCCCACTTGGACGAAGGGACTCACCTGCTCCAAGAAGTAACCTCGCAGATTCCATGCTTCCTCCTGCATCATCTGGAGTTGATGTGACGTGCTTCAACTTTTTTCAAAGAAAGGAATGA 540 0.4537 MDSRTRHIITAFLLVNAVVVKGGGLNFNFYEQTCPNVEDIIRIGIKPWLVDPSTPAALLRLLFHDCQVQACDASILIDSNNATAPSELASDFNFGIRKRELIDALKSMVEAQCPSQVSCSDILILAAREAVDISGGPRINVPLGRRDSPAPRSNLADSMLPPASSGVDVTCFNFFQRKE* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01486 179 Gene3D - 28 160 - -
Pte10g01486 179 ProSiteProfiles Plant heme peroxidase family profile. 24 179 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte10g01486 179 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte10g01486 179 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte10g01486 179 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte10g01486 179 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte10g01486 179 Pfam Peroxidase 47 178 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte10g01486 179 PANTHER PEROXIDASE 25-RELATED 15 177 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte10g01486 179 SUPERFAMILY Heme-dependent peroxidases 24 174 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pte10g01486 179 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte10g01486 179 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte10g01486 179 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte10g01486 179 Gene3D Peroxidase, domain 2 161 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01486 Pte-Chr10 33212996 33213724 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01486 25 178 Peroxidase AT3G03670 47.097 3.07e-38 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01486 K00430 - aew:130771335 212.231