Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01485 ATGGCTTCGCCTTCATCATCCTCTTGGCACGCTCTGACATACAGGATTAGAGCAATTCATGCTACCTTGTATGCCATTTTCTGCACCTATTTGTTTTCTAACGTAATTCTTGTTCATAGTTTCGACGCAAAATCTGTCATTGACTCTCCTTTATTGACTAAAACGATTGGCACTAATCGCACAATTAAGGTTGATATCAATGGAAATGGTGAATTTAAATCTGTTCAAGCTGCAATAGATTCTGTTCCCGAAGGAAATTCTCAATGGGTTATCATCCATGTGAGGAAAGGAATTTATAGGGAAAAGGTACATATACCAAAGAGCAAACCCTACATATTCTTGAGAGGGAATGGAAGAGGAAGAACAGCCATTGTTTGGTCTGAGAGCTCCTCTGACAACATAGAATCTGCTACCTTCAAAGCTGAAGGTCGTAACTTTATTGCCTTTGGAATTAGCTTCAAGAATGAAGCTCCGACTGGGATTGCTTATACCTCACAAAACCAGTCAGTTGCAGCATTTGTGGCAGCAGATGGGGTTGCATTCTACCACTGTGCATTTTACAGCACGCACAACACTCTCTTTGACTACAAGGGCAGGCATTACTACGAGCACTGCTACATTCAAGGCTCAGTTGATTTCATATTTGGTCGTGGTAGATCTGTATTTCATGATTGTGAGATATTTGTCATTGGTGATAAAAGGCTGAAGATTCCTGGATCAATTACAGCACACAACAGAGAAAGTGCAGATGACGATAGTGGCTTCGTCTTTATCAAAGGGAAGGTCTATGGCGTTGGGAATGATGTATACTTAGGAAGGGCTAAGGGTGCTTATTCCAGAGCCATATTTATAAAGTCATACTTGTCAATGTCCATCGTACCGGAAGGTTGGACCAACTGGAGCTATGATGGCAGCACCAAAAATCTGTACCACGCTGAGTACAAGTGCCATGGCCCTGGATCAGTGACAGATAAACGTGCGCCTTGGACCAAGAAGCTCAGTGATGAAGAAGCTGCCCCTTTCATGTCTATTGATTTCATCAGTGGTAAGCTGTGGCTGCCGGTTTGGCACTGA 1074 0.4283 MASPSSSSWHALTYRIRAIHATLYAIFCTYLFSNVILVHSFDAKSVIDSPLLTKTIGTNRTIKVDINGNGEFKSVQAAIDSVPEGNSQWVIIHVRKGIYREKVHIPKSKPYIFLRGNGRGRTAIVWSESSSDNIESATFKAEGRNFIAFGISFKNEAPTGIAYTSQNQSVAAFVAADGVAFYHCAFYSTHNTLFDYKGRHYYEHCYIQGSVDFIFGRGRSVFHDCEIFVIGDKRLKIPGSITAHNRESADDDSGFVFIKGKVYGVGNDVYLGRAKGAYSRAIFIKSYLSMSIVPEGWTNWSYDGSTKNLYHAEYKCHGPGSVTDKRAPWTKKLSDEEAAPFMSIDFISGKLWLPVWH* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01485 357 ProSitePatterns Pectinesterase signature 2. 207 216 IPR033131 -
Pte10g01485 357 Gene3D - 56 356 IPR012334 -
Pte10g01485 357 Pfam Pectinesterase 63 349 IPR000070 GO:0030599|GO:0042545
Pte10g01485 357 SUPERFAMILY Pectin lyase-like 57 355 IPR011050 -
Pte10g01485 357 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 57 353 - -
Pte10g01485 357 FunFam Pectinesterase 56 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01485 Pte-Chr10 33210181 33211892 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01485 59 353 Carbohydrate Esterase AT5G47500 37.377 7.62e-72 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01485 - - qsa:O6P43_003682 553.132