Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01484 ATGAAGCTCCGACTGGGGTTGCTTATACCTCACAAAACCAGTCAGTTGCAGCATTTGTGGCAGCAGATGGGGTTGCATTCTACCACTGTGCATTTTACAGCACGCACAACACTCTCTTTGACTACAAGGGCAGGCATTAACTACGAGCACTGCTACATTCAAGGCTCAGTTGATTTCATATTTGGTCGTGCACACAACAGAGAAAGTGCAGATGACGATAGTGGCTTCGTCTTTATCAAAGGGAAGGTCTATGGCGTTGGGAATGATGTATACTTAGGAAGGGCTAAGGGTGCTAATTCCAGAGCCATATTTATAAAGTCATACTTGTCAATGTCCATCGTACCGGAAGGTTGGACCAACTGGAGCTATGATGGCAGCACCAAAAATCTGTACCACGCTGAGTACAAGTGCCATGGCCCTGGATCAGTGACAGATAAACGTGCGCCTTGGACCAAGATGCTCAGTGACGAAGAAGCTGCCCCTTTCACCTCTGTTGATTTCTTCAGTGGTAAGCTGTGGCTGCCGGTTTGGCACTGA 537 0.4767 MKLRLGLLIPHKTSQLQHLWQQMGLHSTTVHFTARTTLSLTTRAGINYEHCYIQGSVDFIFGRAHNRESADDDSGFVFIKGKVYGVGNDVYLGRAKGANSRAIFIKSYLSMSIVPEGWTNWSYDGSTKNLYHAEYKCHGPGSVTDKRAPWTKMLSDEEAAPFTSVDFFSGKLWLPVWH* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01484 178 ProSitePatterns Pectinesterase signature 2. 53 62 IPR033131 -
Pte10g01484 178 Gene3D - 28 177 IPR012334 -
Pte10g01484 178 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 41 174 - -
Pte10g01484 178 SUPERFAMILY Pectin lyase-like 36 176 IPR011050 -
Pte10g01484 178 Pfam Pectinesterase 64 170 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01484 Pte-Chr10 33184554 33185457 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01484 48 174 Carbohydrate Esterase AT5G07430 31.757 2.50e-25 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01484 - - egr:104417547 198.749