Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01468 ATGCAGCAAGGTGATCAAACGGTAATTAGCTTGAGACCTGGCGGTGGTCGCGGCGGCGGCGGCAGGTTATTTGGTTCCTCCTCATCATCAGCTTCCTCTGCTTTACCTGCTTTTGGTTCCTTCTCATCTGATCCATCTATCTTTCGTCCTCATGGTGGTGGTCCATCTACTTTTTTTGTCAAGACTGGTGACTTAGAGGGTCGTGAACGTGTGCGCTACACCAGAGATCAACTGTTAAAACTCGGAGAGGCCATTTCAGTCCCTGATGATATTCTGAAAATAAAAAGGGAAATTGAAGATGAACTTTTTGGAGAAGAGAAAAACTGGACTCGTGTGGATAACAATCCTCCAAATCAAATTCAATATCGTTATTCTGAACATGATAATCGTGACTGGCGTGGCCGATCTGCACAAAATTCTTCCTCTGTAGAAGAGAAGTCTTGGGAAACTCTGTTAGAGAACAGAGACGTTGCAGGTCGATATGAATCACGGCAGCAAGATAATAATCGATTGAATTCTCAATTTTCAAGGGCACAGATTTCTTCAAATCAAGGGGGAGGTCCTGCTCCTGCTCTGGTAAAGGCTGAGGTTCCGTGGTCAGCTAGAAGGGGTACTCTCTCTGAAAAGGACCGTGTTCTAAAGACTGTCAAGGGGATATTGAATAAGTTGACCCCAGAGAAGTTTGATCTTCTTAAAGGTCAATTAATTGACTCAGGCATCACTTCAGCCGATATCTTAAAGGATGTCATTTCCCTGATATTTGATAAAGCTGTGCTGGAGCCTACATTTTGTCCCATGTATACCGAATTGTGTTCTGATCTTAATGAGAAGCTTCCTCCTTTCCCATCTGATGAACCTGGTGGGAAAGAAATTACTTTCAAGAGAGTCCTCTTAAATATCTGTCAAAAGGCTTTTGAAGGTGCTGATCAATTGAGAGAAGAACTTAGGCAGATGAGTGCCCCTGATCAGGAGATGGAGCGTAGGGATAAAGAAAGGCTTGCGAAGCTCCGCACTCTAGGCAATATTCGCTTAATTGGTGAGCTGTTGAAGCAAAAGATGGTCCCTGAAAAAATAGTCCATCACATTGTGCAGGAGCTTTTAGGCCATCAAGATAACAAGGTCTGTCCTGCTGAGGAAAATGTTGAAGCCATATGTCATTTTTTTAACACCATTGGTAAGCAGCTGGATGAAAGCCCAAAGTCACGTCGGATAAATGATATATACTTTAGCCGTCTGAATAAATTAAGTTCACACCCTCAGCTTGCCCCACGTTTGAGGTTTATGCTTCGGGATGTTTTAGATCTGCGTTCTAACAACTGGGTTCCAAGGCGTGAAGAGGTCAAAGCAAAAACTATCAATGAAATTCATTCCGAGGCGGAAAAGAACCTAGGCTTACGACCTGGAGCCACTGCAAGCATTAGAAATAATCGTGGTGTAATTTCTGGTGGGCAAACTGGGCCAGGTGGGTTCCCCATTACACGACCTGGGACAGGTGGTTTGATGCCTGGGATGCCTGGAACCAGGAAGATGCCTGGAATGCCTGGAACCAGGAAGATGCCTGGGATGCCTGGCATGGATAATGACAACTGGGAGATGCCTAGGACCCGTTCCATGCCAAGAGGTGACAATCCGAATATACATGGAGCAGGGCGTGGGCAGTCACCATTAATGGCTAAGTCCCCCACAATGAATTCAAAACTGTTGCCTCAAGGAAGCGGTGGCTTTGTCAGTGGAAGGAGCAGTGCTCTGTTGCAAGGAAGTGGTGGTATGCCTTCTGTTCGTCCAAACACTGGTGGTTTTGTTAGTGATGCTGCAAATCAGTACTCTCTTCCTGCCAAGGCTTCTGCATCTCCAGTGTCCATTGCTCCAACTCCCACTGAAAAGTCACAGGCTTCAGCCTCAAAGTTGAACACTGAAGATCTTCACAGGAAGACTGTCTCTCTACTTGAAGAATACTTCAGTATCAGGCTATTAGATGAGGCATTTCAGTGCATTGAGGAACTCAACTCACCTGCTTACCATCCAGAGGTTGTGAAGGAATCTATTTCTCTTGCACTTGAAAAAAGTCCACCATGTGTGGAACCTGTTGCTAATCTTCTGGAATATCTTTTCATAAAAAAGATGATTACAGCGAGAGACATAGGGAATGGATGTTTGCTTTATGGCTCGATGCTAGATGATATTGGCATTGATTTACCTAAAGCCCCTAGCAATTTTGGTGAGATTATCGGGAGATTAGTCCTGGCTGGGGGAATGGACTTCAAGGTGGTGAAGGAGATCCTTGCAAAGTTAGAAGAAGACATGTTCCGGAAAGCAATGTTTAACGCAACAATCCGTGTAATTAGTTCAGCATCTGGTCAGGGTATATTGAATTCACAGGCATCTGATATTGAAGCATGTCGAAGCATGCTAGAGTAA 2418 0.4471 MQQGDQTVISLRPGGGRGGGGRLFGSSSSSASSALPAFGSFSSDPSIFRPHGGGPSTFFVKTGDLEGRERVRYTRDQLLKLGEAISVPDDILKIKREIEDELFGEEKNWTRVDNNPPNQIQYRYSEHDNRDWRGRSAQNSSSVEEKSWETLLENRDVAGRYESRQQDNNRLNSQFSRAQISSNQGGGPAPALVKAEVPWSARRGTLSEKDRVLKTVKGILNKLTPEKFDLLKGQLIDSGITSADILKDVISLIFDKAVLEPTFCPMYTELCSDLNEKLPPFPSDEPGGKEITFKRVLLNICQKAFEGADQLREELRQMSAPDQEMERRDKERLAKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGHQDNKVCPAEENVEAICHFFNTIGKQLDESPKSRRINDIYFSRLNKLSSHPQLAPRLRFMLRDVLDLRSNNWVPRREEVKAKTINEIHSEAEKNLGLRPGATASIRNNRGVISGGQTGPGGFPITRPGTGGLMPGMPGTRKMPGMPGTRKMPGMPGMDNDNWEMPRTRSMPRGDNPNIHGAGRGQSPLMAKSPTMNSKLLPQGSGGFVSGRSSALLQGSGGMPSVRPNTGGFVSDAANQYSLPAKASASPVSIAPTPTEKSQASASKLNTEDLHRKTVSLLEEYFSIRLLDEAFQCIEELNSPAYHPEVVKESISLALEKSPPCVEPVANLLEYLFIKKMITARDIGNGCLLYGSMLDDIGIDLPKAPSNFGEIIGRLVLAGGMDFKVVKEILAKLEEDMFRKAMFNATIRVISSASGQGILNSQASDIEACRSMLE* 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01468 805 MobiDBLite consensus disorder prediction 474 524 - -
Pte10g01468 805 SMART if4_15 213 439 IPR003890 GO:0003723|GO:0005515
Pte10g01468 805 MobiDBLite consensus disorder prediction 1 34 - -
Pte10g01468 805 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 65 789 IPR045208 GO:0003743
Pte10g01468 805 MobiDBLite consensus disorder prediction 125 146 - -
Pte10g01468 805 Pfam MA3 domain 642 752 IPR003891 -
Pte10g01468 805 FunFam Eukaryotic translation initiation factor isoform 4G-2 634 795 - -
Pte10g01468 805 Pfam MIF4G domain 213 439 IPR003890 GO:0003723|GO:0005515
Pte10g01468 805 Gene3D - 204 440 - -
Pte10g01468 805 SUPERFAMILY ARM repeat 206 442 IPR016024 -
Pte10g01468 805 FunFam Eukaryotic translation initiation factor isoform 4G-2 204 440 - -
Pte10g01468 805 Gene3D - 633 799 - -
Pte10g01468 805 MobiDBLite consensus disorder prediction 616 636 - -
Pte10g01468 805 SUPERFAMILY ARM repeat 635 783 IPR016024 -
Pte10g01468 805 ProSiteProfiles MI domain profile. 640 762 IPR003891 -
Pte10g01468 805 SMART ma3_7 641 753 IPR003891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01468 Pte-Chr10 32852728 32857957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01468 1 803 Eukaryotic Initiation Factors Gene Family AT5G57870 64.982 0.0 974
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01468 K03260 - qsa:O6P43_022212 1133.24