Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01463 ATGTTTGACTGTGGTCACAAGTCAGAATACATGGCTGGACAGCGAGAAAAATTTGTGAGGTTGGATGACTTGGACTCAAGATTATCTTCACCTTCTGCCAGTGGAGGGAAAACATGTGGCTTTGGCATTGAGAAATTAACCAATATTGGTCGTCAAAATCATACAGCATCTGGATCTTTCAAGAAAGGAATGAGAAAGGGATCTGAAGGACTAAAGTCAATTGGTCGCTCATTTGGGTTTGGGGTTTCTACAGCTGTCTTCCCAGAAGATCTTAAGGTTTCAGAGAACAAGATATTTGACCCTCAAGACAAATTTCTGTTGTTTTGGAACAAGCTTTTTGTAGTCTCATGCATCCTGGCAGTTTCCGTCGACCCTCTGTTCTTTTATCTACCTGTTATTAACGACAAATCAAATTGTTTGGGAATAGACCGGAAACTGGCAATAATTGTGACAACTTTGCGGACAATAATTGATGCCTTTTATTTTATACACATGGCCCTCCAATTTCGGACTGCTTATATTGCCCCATCATCTCGTGTTTTTGGACGTGGTGAACTTGTGATAGATCCTGGACAAATAGCCAAGCGATATATGCGTCAGTATTTTCTTGTTGATCTTCTATCTGTGTTACCACTACCTCAGATTGTGGTTTGGAGCTTTCTTCAGAGATCACATGGTTCAGATGTTTTGGCGACAAAGCAGGCATTGCTGTACATTGTCTTGTTTCAGTTTATTCCTCGGTTTCTCCGAATGATGCCATTAACTTCAGAACTTAAAAGGACAGCGGGAGTATTTGCTGAAACTGCCTGGGCCGGTGCTGCATATTATTTGCTATTATATATGCTAGCTAGTCATGTAGTTGGGGCATTCTGGTATTTGTTAGCTGTAGAGCGGAATGATGCATGCTGGCAGGAGGCGTGCGTAGGAAATTGCAATAAAGATTTCTTATATTGCGGCAACCAAGGCATGAAAGGATATAGTGTCTGGAACCAAACAGTACTTAGTGATCATTGCACAACAAGTGGCGACAACCCTCCTTTTCATTTTGGAATTTTCAAACAGGCATTGTCATCTAGCATTGTTTCATCCAAAAAATTTGTTACCAAATATTGTTACTGTTTATGGTGGGGGCTACAGAATTTGAGTACACTTGGTCAGGGGCTCGAAACCAGCACCTACCCTGGAGAGGTGATATTTTCTATAGCTCTTGCCATATTTGGACTCATCCTCTTTGCGCTTCTGATTGGTAACATGCAGACGTATCTTCAATCTCTTACAATTCGTCTTGAAGAAATGAGAGTTAAAAGGCGTGATTCGGAGCAGTGGATGCATCATAGATTGCTTCCTCAAGATCTGAGAGAGCGGGTTAGACGTTATGATCAATACAAGTGGTTAGCCACTAGGGGTGTGGATGAAGAAAGTTTGGTTCAGAGCCTGCCAAAGGATCTTAGAAGAGACATAAAGCGTCATCTCTGCCTGGCTTTAGTTAGAAGGGTTCCCTTATTTGAGAATATGGACGAGAGGCTGCTTGATGCTATATGTGAGAGGCTGAAACCATGTTTATTCACAGATAATACCTACATAGTTAGGGAAGGAGATCCGGTTGATGAGATGCTTTTCATTATACGTGGCCGTCTTGAGAGTGTGACTACTGATGGTGGAAGAAGTGGGTTCTTCAACCGCAGTTTCCTAAAAGAAGGTGATTTCTGTGGTGAGGAGCTTCTGACATGGGCGCTGGATCCCAAGTCTTGTGCTAACCTTCCATCTTCTACACGGACAGTGAAGGCATTAGCTGAAGTGGAGGCTTTTGCCTTGAGAGCTGATGAGTTAAAGTTTGTTGCTAGTCAGTTTAGGAGACTTCATAGCAGACAGGTTCAACATACCTTCCGTTTTTACTCTCAGCAATGGAGGACCTGGGCTGCCTGCTTCATCCAGGCTGCATGGCGTCGTTATTGCAAGAGGAAAACCATGGAGCTTCGTAGGAAAGAGGAGGAAGAAGCTGAAGGAGCCCGCAACAATGCTGCCAGTGGATCGTACAGTCTTGGTGCCACCCTGTTAGCCTCAAGGTTTGCAGTTAATGCTCTCCGCGGTGTACACCGTTATCGAAATGCCAAGACTGCCAGGGAGTTGGTGAAACTACAGAAGCCACCAGAGCCGGATTTCACTGCAGATGATCCAGAATGA 2184 0.4373 MFDCGHKSEYMAGQREKFVRLDDLDSRLSSPSASGGKTCGFGIEKLTNIGRQNHTASGSFKKGMRKGSEGLKSIGRSFGFGVSTAVFPEDLKVSENKIFDPQDKFLLFWNKLFVVSCILAVSVDPLFFYLPVINDKSNCLGIDRKLAIIVTTLRTIIDAFYFIHMALQFRTAYIAPSSRVFGRGELVIDPGQIAKRYMRQYFLVDLLSVLPLPQIVVWSFLQRSHGSDVLATKQALLYIVLFQFIPRFLRMMPLTSELKRTAGVFAETAWAGAAYYLLLYMLASHVVGAFWYLLAVERNDACWQEACVGNCNKDFLYCGNQGMKGYSVWNQTVLSDHCTTSGDNPPFHFGIFKQALSSSIVSSKKFVTKYCYCLWWGLQNLSTLGQGLETSTYPGEVIFSIALAIFGLILFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPQDLRERVRRYDQYKWLATRGVDEESLVQSLPKDLRRDIKRHLCLALVRRVPLFENMDERLLDAICERLKPCLFTDNTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRSFLKEGDFCGEELLTWALDPKSCANLPSSTRTVKALAEVEAFALRADELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYCKRKTMELRRKEEEEAEGARNNAASGSYSLGATLLASRFAVNALRGVHRYRNAKTARELVKLQKPPEPDFTADDPE* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01463 727 ProSiteProfiles cAMP/cGMP binding motif profile. 501 612 IPR000595 -
Pte10g01463 727 Pfam Cyclic nucleotide-binding domain 522 612 IPR000595 -
Pte10g01463 727 Gene3D - 111 426 - -
Pte10g01463 727 Coils Coil 653 673 - -
Pte10g01463 727 SUPERFAMILY cAMP-binding domain-like 430 621 IPR018490 -
Pte10g01463 727 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 90 721 - -
Pte10g01463 727 SUPERFAMILY Voltage-gated potassium channels 100 423 - -
Pte10g01463 727 ProSiteProfiles IQ motif profile. 637 666 IPR000048 GO:0005515
Pte10g01463 727 Pfam Ion transport protein 108 427 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pte10g01463 727 Gene3D Helix hairpin bin 429 492 - -
Pte10g01463 727 PRINTS EAG/ELK/ERG potassium channel family signature 414 423 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte10g01463 727 PRINTS EAG/ELK/ERG potassium channel family signature 396 407 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte10g01463 727 PRINTS EAG/ELK/ERG potassium channel family signature 165 174 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte10g01463 727 PRINTS EAG/ELK/ERG potassium channel family signature 464 471 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte10g01463 727 PRINTS EAG/ELK/ERG potassium channel family signature 370 387 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte10g01463 727 PRINTS EAG/ELK/ERG potassium channel family signature 282 292 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte10g01463 727 FunFam Cyclic nucleotide-gated ion channel 1 499 617 - -
Pte10g01463 727 Gene3D Jelly Rolls 499 619 IPR014710 -
Pte10g01463 727 CDD CAP_ED 501 632 IPR000595 -
Pte10g01463 727 FunFam Cyclic nucleotide-gated ion channel 1 428 492 - -
Pte10g01463 727 SMART cnmp_10 501 632 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01463 Pte-Chr10 32640230 32647082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01463 11 724 Ion Channels AT5G57940 77.624 0.0 1134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01463 K05391 - qsa:O6P43_022199 1185.63