Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01459 ATGGCAATAGTGGGAATCGAGGTAGCTGAAGCTCAAACTAAAAGCCAAGCTCAGCTGTCTATGTCCCCAACTACAGTATCAGAACTATCACAAACCTCTGTGAACCATTCTCTTTCATCTGCTCCAAGTCCTATTGTACCAGATAATAGCCTAACGCCTCCAAAAGGCAGTAGCTTCCGTATGCTGCAGTCAGACCGGAAAAATCATTCAAATGGGAAAAAGATAACTCCAATTTTGGTCGGAAAGTCATCAACTTCTGATGGATATAACTGGCGGAAGTATGGACAGAAGCAAGTAAAGAGTCCTACAGGCTTTCGAAGCTATTACAGATGTACATATTCTGACTGCAGCGCAAAAAAGATTGAATGCTGCAATAACTTAGGTTGTGTAGTCGAGATTGTTTACAGAAGTCATCATTCTCACGATCCACCCAAGAAGGTTAACTCCAGTAAGGAAAGTAAGCTCACTCCATGGAGTTTGCCACTTGAAGAAAACAGTGTCGTAGATCCTGTTAGCATGCATGATGACATAGATCCATCCACTTCTTCAAAAGAACCTGTTCATCAGACACCCTCCATTTCAGAAATAAAGCAACAAAATTCTTGCATCCCAATTGATAATGACGAAGCTAAGGTCAGGGAGGAGCATGTTGACAAGCTAGAGCCAAGAAAAAGATTGAAGAAAGAAGAATTGAACGCAGATTCTCACATGAAACCTGGAAAGAAACCCAAGTTTGTTGTACATGCAATGGGTAATGTCGCGATCTCAGGTGATGGATATCGCTGGCGCAAGTATGGACAGAAAATGGTAAAGGGAAATCCTAACCCAAGAAACTATTATAGATGCACTTCTGCTGGATGTCCAGTCCGTAAACACATTGAGACAGCGGTTCAGAACACAAGTGCTATTGTAATAACTTATAAGGGAGTACATGACCATGATATACCAGTGCCCAAGAAGAGGCACGGGCCTCCAAGTACACCTCTTGTTACTGCTACTGCACCTACCGCTTCGATGGATAGTTTACTGACTAAGAAAGTTGAGACCTTACAAAATCAGATATCTTCTACTTTGGGGCCAGTGGACAAAGAAGGAGAATTGACGAGTCAAGCCATGGACCTCGGAGGTGAGAAAGCAATGGAGTCAGCGCGAACTCTTTTAAGTATAGGTTTTGAAAACAAACCTTGCTAG 1191 0.4257 MAIVGIEVAEAQTKSQAQLSMSPTTVSELSQTSVNHSLSSAPSPIVPDNSLTPPKGSSFRMLQSDRKNHSNGKKITPILVGKSSTSDGYNWRKYGQKQVKSPTGFRSYYRCTYSDCSAKKIECCNNLGCVVEIVYRSHHSHDPPKKVNSSKESKLTPWSLPLEENSVVDPVSMHDDIDPSTSSKEPVHQTPSISEIKQQNSCIPIDNDEAKVREEHVDKLEPRKRLKKEELNADSHMKPGKKPKFVVHAMGNVAISGDGYRWRKYGQKMVKGNPNPRNYYRCTSAGCPVRKHIETAVQNTSAIVITYKGVHDHDIPVPKKRHGPPSTPLVTATAPTASMDSLLTKKVETLQNQISSTLGPVDKEGELTSQAMDLGGEKAMESARTLLSIGFENKPC* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01459 396 ProSiteProfiles WRKY domain profile. 251 316 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte10g01459 396 Gene3D WRKY domain 75 145 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte10g01459 396 Gene3D WRKY domain 241 317 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte10g01459 396 Pfam WRKY DNA -binding domain 258 313 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte10g01459 396 Pfam WRKY DNA -binding domain 87 141 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte10g01459 396 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 26 344 IPR044810 GO:0003700
Pte10g01459 396 MobiDBLite consensus disorder prediction 183 198 - -
Pte10g01459 396 FunFam WRKY transcription factor 244 317 - -
Pte10g01459 396 ProSiteProfiles WRKY domain profile. 80 144 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte10g01459 396 MobiDBLite consensus disorder prediction 172 198 - -
Pte10g01459 396 SMART WRKY_cls 256 315 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte10g01459 396 SMART WRKY_cls 85 143 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte10g01459 396 SUPERFAMILY WRKY DNA-binding domain 83 144 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte10g01459 396 MobiDBLite consensus disorder prediction 36 55 - -
Pte10g01459 396 SUPERFAMILY WRKY DNA-binding domain 249 316 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte10g01459 396 MobiDBLite consensus disorder prediction 139 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01459 Pte-Chr10 32612397 32615510 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01459 31 397 WRKY Transcription Factor Family AT4G30935 50.789 2.79e-116 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte10g01459 WRKY 2.8e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01459 - - vvi:100262194 497.278