Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01457 ATGGGTTTCAGAGTTTACTGTTCCATTCTAGTCCTGTCACTTTTCTTCAAGCATTTGACTTCCCAGCAACCCAACACCGATGAGTTCTTTGTGTCTGAGTTTTTCAAAAAGATGGGTGCAAACTCATCCAACGTTGTAAACTTTTCTGGTCCTGTGTGTACCTGGCAAGGTGTTTTCTGCGACATCAACAAAGAATTCGTTCTTGAATTGGTAGCTTCAGGTTTAGGCCTCTCTGGGGCGATTCCTGAAACGACCATTGGCAAACTCCACAACCTTCAGTCTTTGGATCTCAGCAACAACAGAATAACCTCTTTGTCTTCAGATTTCTGGAGTTTAAACTCACTCAAAAGCATCAATCTCTCCTTCAACCAGATTTCTGATTCACTTTCCAACAATATTGGCAATTTCGGCAAGCTAGAAAGCTTGGACTTATCTCACAACAAGTTCTCTGGGGAGCTGCCAGATGGTTTAGGCTCCCTTGTCAGCTTGAGGGTCCTCAACCTTGACCATAACAGTTTTCAGCAGAGCATATCTTCCAAAATTCTTCAATGCCACTCTCTAGTCACTGTTGATCTGTCTTCGAATAAATTCAATGGGACTCTTCCGGACAGTTTTGCTGCTGCTTTCCCAAAGCTGGAGTACTTGAACCTCGCAGAGAATGATATTCATGGTAGGGATTCTGACTTATCTGGCCTTAAATCCATTACTACTCTCAACATTTCTGGAAACTTGTTCGAGGGTTCTGTACTGGACGTGTTTCAAGGGCAGCTGCAGATCATTGATCTTAGCAGAAACCATTTTCAGGGTCACATTTCTCAGGTACAGATTAATTCTAGTTACAACTGGTCTCATTTGGTCTATTTGGATTTATCTGAGAACCGGCTTAGTGGAGAAATTTTCCATGTTTTGGAGCAAGCACAGAATCTAAAATACCTTAGTCTTGCACACAACAGATTTAACAGACAAAAGTTTCCGTATATTGGATTACTCTCAGGTTTAGAATATCTCAACATGTCCGGTGCAAGTCTTATAGGTAGTATTCCAAATGAAATCTCACGATTGAGTAATATAAGAACTCTTGATCTCTCTGGAAACTATTTTACTGGCCACATACCATTGCTGCATGTGAGAAATCTTCGAATCCTAGATGTGTCACACAACAATTTGAGTGGAGAAATTCCGCTATCTGTCTTAGAGAAACTACCATGGATGGAGAGATTTAACTTCTCTGAAAACAACCTGACATTTTGTGCTTCAGAAATCTCTCCTGAACTTCTCAAAACAGCTTTTCTTGGATCAGAAAACAGCTGCCCCATTGCAGCAGATCCTGTCTTGTTCAAGAGAAAAGTCACTAAACAAAATGGACTAAAGCTTGCCGTTGCTTTAGCCATCTCAGTGATCTTCCTTCTTGCTGGTTTGTTGTTTCTAGCATTTGGTTGTAGGAGGAAAAACAGAAAATGGATTGTCAAGCAAACTTCATACAAAGAAGAACAAAACATTTCGGGTCCCTTTTCATTCCAGACTGATTCAACCACATGGGTGGCTGATGTCAAGCAAGCTACTTCAGTCCAAGTTGTAATCTTTGAGAAGCCCTTGATGAATATTACATTTGCAGACCTCTTATCTGCAACTTCAAATTTCGATAGGGGAACCCTTTTGGCTGAAGGGAAATTTGGTCCGGTCTATAGATGTTTTCTTCCTGGTGGAATTCATGTAGCAGTGAAAGTTTTGGTCCATGGATCAACATTGACTGATCAAGAAGCTGCAAGAGAGCTTGAGTATCTCGGTAGAATCAGGCATCCGAATCTTGTTCCTCTAACTGGGTATTGCTTAGCTGGGGACCAAAGGATTGCCATATATGAGTACATGGAGAATGGGAACCTGCAGAATTTGCTTCACGACTTACCCTTAGGATTTCAAACAACTGATGATTGGAGTACTGATACATGGGAAGAAAATGCTGAAAGTAAAATTCAGAATGTAGGCTCTGAAGGGTTGTTAACAACTTGGAGATTTCGTCATAAAATCGCCCTTGGTACTGCTAGAGCACTTGCTTTTCTTCACCATGGCTGTTCACCTCCAATTATTCATCGAGATGTAAAAGCTAGTAGTGTGTATCTGGATTACAACTTGGAGCCAAGGTTGTCCGATTTCGGGTTAGCCAAAGTCTTTGGAAATGGCTTAGATGAGGAGATTGCTAATGGTTCGCCTGGTTATATGCCTCCAGAGTTTATTCAACCTGATAATGACACCCCCACTCCAAAATCTGATGTATATTGTTTCGGAGTTGTTTTGTTTGAACTCATAACTGGAAAGAAGCCAATTGGCGATGATTATCCTGATGAGAAAGAAGCAGATTTGGTTAACTGGGTGAGAGGACTGGTCAGAAAGAATAATGGTTCAGGTGCTATTGATCCGAAAATTCGTCATACGGCACCAGATGAACAGATAGAGGAGGCTATCAAGATTGGATATCTCTGCACAGCTGATCTTCCTTCAAAGCGGCCAAGCATGCAGCAAATAGTTGGACTCCTTAAAGATATTGAACCTAAAGTTGATTCATGA 2565 0.4125 MGFRVYCSILVLSLFFKHLTSQQPNTDEFFVSEFFKKMGANSSNVVNFSGPVCTWQGVFCDINKEFVLELVASGLGLSGAIPETTIGKLHNLQSLDLSNNRITSLSSDFWSLNSLKSINLSFNQISDSLSNNIGNFGKLESLDLSHNKFSGELPDGLGSLVSLRVLNLDHNSFQQSISSKILQCHSLVTVDLSSNKFNGTLPDSFAAAFPKLEYLNLAENDIHGRDSDLSGLKSITTLNISGNLFEGSVLDVFQGQLQIIDLSRNHFQGHISQVQINSSYNWSHLVYLDLSENRLSGEIFHVLEQAQNLKYLSLAHNRFNRQKFPYIGLLSGLEYLNMSGASLIGSIPNEISRLSNIRTLDLSGNYFTGHIPLLHVRNLRILDVSHNNLSGEIPLSVLEKLPWMERFNFSENNLTFCASEISPELLKTAFLGSENSCPIAADPVLFKRKVTKQNGLKLAVALAISVIFLLAGLLFLAFGCRRKNRKWIVKQTSYKEEQNISGPFSFQTDSTTWVADVKQATSVQVVIFEKPLMNITFADLLSATSNFDRGTLLAEGKFGPVYRCFLPGGIHVAVKVLVHGSTLTDQEAARELEYLGRIRHPNLVPLTGYCLAGDQRIAIYEYMENGNLQNLLHDLPLGFQTTDDWSTDTWEENAESKIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDVKASSVYLDYNLEPRLSDFGLAKVFGNGLDEEIANGSPGYMPPEFIQPDNDTPTPKSDVYCFGVVLFELITGKKPIGDDYPDEKEADLVNWVRGLVRKNNGSGAIDPKIRHTAPDEQIEEAIKIGYLCTADLPSKRPSMQQIVGLLKDIEPKVDS* 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01457 854 Gene3D Phosphorylase Kinase; domain 1 507 622 - -
Pte10g01457 854 Pfam Protein kinase domain 551 842 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g01457 854 FunFam Leucine-rich repeat receptor protein kinase EMS1 129 227 - -
Pte10g01457 854 Pfam Leucine Rich repeat 377 392 IPR001611 GO:0005515
Pte10g01457 854 SUPERFAMILY L domain-like 36 424 - -
Pte10g01457 854 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 186 300 IPR046959 -
Pte10g01457 854 Gene3D Ribonuclease Inhibitor 276 435 IPR032675 -
Pte10g01457 854 ProSiteProfiles Leucine-rich repeat profile. 91 112 IPR001611 GO:0005515
Pte10g01457 854 ProSiteProfiles Protein kinase domain profile. 547 852 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g01457 854 Gene3D Ribonuclease Inhibitor 30 177 IPR032675 -
Pte10g01457 854 SMART LRR_typ_2 330 354 IPR003591 -
Pte10g01457 854 SMART LRR_typ_2 136 159 IPR003591 -
Pte10g01457 854 SMART LRR_typ_2 160 184 IPR003591 -
Pte10g01457 854 SMART LRR_typ_2 376 400 IPR003591 -
Pte10g01457 854 SMART LRR_typ_2 232 255 IPR003591 -
Pte10g01457 854 SMART LRR_typ_2 89 111 IPR003591 -
Pte10g01457 854 SMART LRR_typ_2 112 135 IPR003591 -
Pte10g01457 854 SUPERFAMILY Protein kinase-like (PK-like) 532 846 IPR011009 -
Pte10g01457 854 Pfam Leucine Rich Repeat 138 160 IPR001611 GO:0005515
Pte10g01457 854 PRINTS Leucine-rich repeat signature 376 389 - -
Pte10g01457 854 PRINTS Leucine-rich repeat signature 92 105 - -
Pte10g01457 854 FunFam Calmodulin-binding receptor kinase CaMRLK 255 373 - -
Pte10g01457 854 Gene3D Ribonuclease Inhibitor 178 275 IPR032675 -
Pte10g01457 854 ProSiteProfiles Leucine-rich repeat profile. 378 399 IPR001611 GO:0005515
Pte10g01457 854 Pfam Leucine rich repeat 80 125 IPR001611 GO:0005515
Pte10g01457 854 Pfam Leucine rich repeat 186 244 IPR001611 GO:0005515
Pte10g01457 854 FunFam Putative LRR receptor-like serine/threonine-protein kinase 508 622 - -
Pte10g01457 854 Gene3D Transferase(Phosphotransferase) domain 1 623 853 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01457 Pte-Chr10 32604449 32607399 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01457 69 848 Receptor kinase-like Gene Family AT5G07280 32.695 8.70e-114 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Pte10g01457 Pkinase 9.9e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01457 - - qsa:O6P43_002991 1327.38