Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01447 ATGCAAGGAATGAACTCCCTCTTGAATTCTTCACAAATTTCACTTCAGGACCTTCACAATACGCAACAACACCAACATCCGCAGATCCAAGACTCTCAGATGCATCACCAGCTCCACCATCCCACTATTACTGACTACGACCCTTCCTCCAATGATGATTTTCTCGAGCAAGTTCTTTCTACGATTCCTTCCTGCTCGTGGCCTGACCTGAATCCGTCGTCTGATCCAAAGCCCTTATGGGACCTTAACCCAAATAACTCTGTTCATTTCACCGGCGCTGCCAATGTCAAGTCCTCCGATGACCTTTCTGACGATACCACTGCGCCGTCCAACAACACGGAGAATGTTGGCTTTCAGTTCGATGAGCAGGTTAACTTGGCGTCTAAGTTCCGAAATCATCAGATCAGTGCCAGTTCGACCAACGGAAAATCGCCTGCTGCGGCAGCTCTGTTGCTTCACCAGCAGCTTCTCATGTCCAGAGGCATTGCTTCTGCCGGGGGTATTGGTTCCAACGGGCATGGCGCTGATTCCGGGCTCCTTCAGATGCCGTTGTCGATGGATGGAGGATTTGATCGCCTACAAAACGACGGTGTGGATGGGGGGTCGTCGTTTCAGTCTCCGAATCCGGGTGGTGACGGTTCGGTTCAAGCTCTGTTTAACGGGTTTCATGGATCTCTGCATGCAAATCCTCAAGCTTCGACCCAGGCTCAACCATTTCACCATCCTCAGGGAGCCGGAGTGATGCAGGGTCAGAATTATGGAGGATCAGGAACGGTTAACGGCCAAGCCCCGGCGAGTGGTTCTGCCGGCGGTGCACCTGCACAGCCGAAACCGAGGGTTAGAGCTAGGCGAGGTCAAGCCACTGACCCACACAGTATCGCTGAGAGATTGCGAAGGGAGAGAATTGCAGAAAGAATGAAAGCCCTTCAGGAGCTTGTTCCCAATGCTAACAAGACCGACAAGGCTTCCATGCTGGATGAGATCATCGATTATGTCAAATTCTTACAGCTACAAGTCAAGGTTCTCAGCATGAGCAGATTGGGCGGTGCGGCTGCGGTGGCACCCTTAGTTGCTGATGTGTCCTCTGAGGGAGGTGGTGACTGTATCCAGACAAACGGCAATGGTGGGACCATGGGACGGAACTCCAATGGCACCCAAACGGCGGCGTCTTCCAACAACGACAGCCTCACTATGACTGAGCAGCAGGTGGCCAAGCTCATGGAGGAAGACATGGGTTCCGCCATGCAATACCTCCAAGGCAAAGGCCTCTGTCTGATGCCCATCTCACTTGCTACTGCCATCTCAACCGCCACGTGTCACTCAAGAAATCCCTTGATCAACCATGGTCAAAACAGCGCCCACAACAACCCCCTAATGGCATCCAACGGCGACGTGCCTTCCTCACCTAGTATGTCGGTGCTGACAGTGCAATCAGCCAACGTGATAAACGCTGGAGGGGACAGCTCCGTTAAGGACGCAGCGTCCGTTTCAAAGCCGTGA 1500 0.53 MQGMNSLLNSSQISLQDLHNTQQHQHPQIQDSQMHHQLHHPTITDYDPSSNDDFLEQVLSTIPSCSWPDLNPSSDPKPLWDLNPNNSVHFTGAANVKSSDDLSDDTTAPSNNTENVGFQFDEQVNLASKFRNHQISASSTNGKSPAAAALLLHQQLLMSRGIASAGGIGSNGHGADSGLLQMPLSMDGGFDRLQNDGVDGGSSFQSPNPGGDGSVQALFNGFHGSLHANPQASTQAQPFHHPQGAGVMQGQNYGGSGTVNGQAPASGSAGGAPAQPKPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADVSSEGGGDCIQTNGNGGTMGRNSNGTQTAASSNNDSLTMTEQQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHSRNPLINHGQNSAHNNPLMASNGDVPSSPSMSVLTVQSANVINAGGDSSVKDAASVSKP* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01447 499 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 123 434 - -
Pte10g01447 499 MobiDBLite consensus disorder prediction 185 294 - -
Pte10g01447 499 MobiDBLite consensus disorder prediction 226 240 - -
Pte10g01447 499 MobiDBLite consensus disorder prediction 249 265 - -
Pte10g01447 499 MobiDBLite consensus disorder prediction 96 116 - -
Pte10g01447 499 FunFam Transcription factor bHLH66 283 348 - -
Pte10g01447 499 MobiDBLite consensus disorder prediction 372 393 - -
Pte10g01447 499 MobiDBLite consensus disorder prediction 448 471 - -
Pte10g01447 499 SMART finulus 292 341 IPR011598 GO:0046983
Pte10g01447 499 MobiDBLite consensus disorder prediction 198 213 - -
Pte10g01447 499 Gene3D - 281 343 IPR036638 GO:0046983
Pte10g01447 499 MobiDBLite consensus disorder prediction 19 52 - -
Pte10g01447 499 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 284 346 IPR036638 GO:0046983
Pte10g01447 499 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 286 335 IPR011598 GO:0046983
Pte10g01447 499 Pfam Helix-loop-helix DNA-binding domain 291 336 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01447 Pte-Chr10 32494754 32498795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01447 265 498 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 62.903 6.92e-90 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte10g01447 HLH 2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01447 - - vvi:100243222 563.918