LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte10g01439	ATGGGATTGGATAAGTTTCAAGATATGGAAAACTCTAATAACAAGAGACGGTATGAGCTGGTTGACGGAGATGGTGCACAAAACTTGTATCAATCAAAGAAGCCAAGGTTACCAGCTTTAGCCAGTGTAATTGTTGAGGCTCTGAAGGTGGACAGTTTGCAAAGGTTTTGCTCATCTTTAGAACCTCTTCTTCGAAAAATTGTAAGTGAAGAAGTGGAACGTGCTTTGACAAGATTGGGCCCCAATCTGGCTCGAAGAACTCCTGCTCCAAGAATACAAGGACCGGGGGAGAGAAATCTGAAGCTTCAATTCAGAACAAGGATGCCACCTCACTTATTTACAGGTGGTAAGGTGGAGGGAGAACAAGGAGCCCCCATCCACGTTGTTTTGGTAGACCAGAACACTGGAGCTGTAGTCCAAACTGGACCAGAATCTGCAGCTAAATTGAATGTAGTTGTTCTGGAAGGCGATTTCAATGAGGAAGCACATGATGATTGGACAAAAGATGACTTCCAAAACCATGAAGTGAAGGAGCGTGAGGGGAAGAGGCCACTTTTAACTGGAGAATTGCAAATAACTTTGAAGGAAGGAGTGGGCACCTTGGGTGATCTTTCATTCACCGACAATTCTAGCTGGATAAGGAGCAGAAAATTTAGGCTTGGTGTGAAGGTAGCTCCTGGTTATTGTGACAGGATTCGAGTCCGTGAGGGAAAGTCTGAAGCTTTTGCAGTTAAAGACCATAGAGGAGAATTGTACAAGAAGCATTATCCACCAGCTTTGCATGATGAAGTTTGGAGATTGGATCGAATTGCAAAGGATGGGGCACTGCACAAAAAGTTGGTTCAGGCTAACATAGTTACTGTTGAAGATTTCCTTCGGTTTCTTGTCAAGGATCCACAGAAACTGAGAAGTCTACTTGGCAGTGGAATGTCCAACAGAATGTGGGAGAATACTGTAGAACATGCCAAAACATGTGTCATGGGTGGCAAGCTTTTTGTATACTTCATCGATAATACACACAGCTCCGGTGCGGTGTTTAACCATATATATGAGCTTACAGGCCTCATTAGCAATGGACAGTTCCTGACTCTGGAATCTCTCAACCATAGTCAAAAGGTTTTAGTAGATTCCATGGTGAGGAAAGCATATGAAAATTGGAACCAAGTTATTGAATATGATGGAAAAATTCTTGGTTCTCATGGTAAAGCTAAACCGGGAATGAAATCTTCTGTCCCTCATGTCATTGATCATAAACATGTGGAAGATCGACACTTTGCGGCTTCAACTCAAAGCATGCAACAGTATGCATTTTCTGCACCGAGTATGCAAAGAATCGAAGATAGAAAGTCAACAGGTTCTGGTTTGAATATTGAATATCCATTTATGAGGTCAGATCATTTATTGGGGACGACAACATTTAACAATCCTCAGCTAGCACTTGCAGGAAGCATAGATTATGGAAACCCTGTGCTTGGAAGTTCATATTTTCCTGTTGACTGGACGTCAAGGCTGCAAAATGGGGAAGGATTAGAAGACATTGTTACCGAAGAAATCCGCCTTAAAAGCACAGAGATGTTAGAGAGTGACGACATGCAACGATTGCTTACGACACTTAATGCAGGAGTAGTTGCTCATCCTTCTGACGAGGCTGCTTGTTTTACTTACGGTCTGCAATATCAGTCTCAAATGTATCAGCCTGCAAAGCAGGACAGGGAGAAAACGTCAGGGAAAGCTGTTGTTGGATGGCTTAAGCTCAAAGCGGCTTTAAGGTGGGGAATATTTATTAGGAGGAGAGCTGCAGAGAGAAGAGCTCAGCTTTATGAATTAGACTAA	1833	0.4277	MGLDKFQDMENSNNKRRYELVDGDGAQNLYQSKKPRLPALASVIVEALKVDSLQRFCSSLEPLLRKIVSEEVERALTRLGPNLARRTPAPRIQGPGERNLKLQFRTRMPPHLFTGGKVEGEQGAPIHVVLVDQNTGAVVQTGPESAAKLNVVVLEGDFNEEAHDDWTKDDFQNHEVKEREGKRPLLTGELQITLKEGVGTLGDLSFTDNSSWIRSRKFRLGVKVAPGYCDRIRVREGKSEAFAVKDHRGELYKKHYPPALHDEVWRLDRIAKDGALHKKLVQANIVTVEDFLRFLVKDPQKLRSLLGSGMSNRMWENTVEHAKTCVMGGKLFVYFIDNTHSSGAVFNHIYELTGLISNGQFLTLESLNHSQKVLVDSMVRKAYENWNQVIEYDGKILGSHGKAKPGMKSSVPHVIDHKHVEDRHFAASTQSMQQYAFSAPSMQRIEDRKSTGSGLNIEYPFMRSDHLLGTTTFNNPQLALAGSIDYGNPVLGSSYFPVDWTSRLQNGEGLEDIVTEEIRLKSTEMLESDDMQRLLTTLNAGVVAHPSDEAACFTYGLQYQSQMYQPAKQDREKTSGKAVVGWLKLKAALRWGIFIRRRAAERRAQLYELD*	611

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte10g01439	610	Pfam	Calmodulin binding protein central domain	259	325	IPR046830	-
	Pte10g01439	610	PANTHER	OS02G0177800 PROTEIN	17	531	IPR012416	GO:0005516
	Pte10g01439	610	Pfam	Calmodulin binding protein C-terminal domain	330	392	IPR046829	-
	Pte10g01439	610	Pfam	Calmodulin binding protein-like N-terminal domain	100	247	IPR046831	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte10g01439	Pte-Chr10	32435283	32439520	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte10g01439	9	611	Calmodulin-binding Proteins	AT2G24300	59.871	0.0	713

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte10g01439	-		-	qsa:O6P43_022162	839.336