Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01435 ATGCAGCCTTCCCATAAGACCTTTAGGATCAAGAAAAAGCTAGGTAAGAAGATGAGGCAGAACAGGCCTATCCCTTACTGGATCCGCATGAGGACCGACAACACCATCAGGTACAACGCCAAACGCAGGCACTGGCGCAGGACCAAGCTTGGATTTTGA 159 0.5031 MQPSHKTFRIKKKLGKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF* 53
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01435 52 Gene3D Ribosomal protein L39e 2 52 IPR023626 -
Pte10g01435 52 Pfam Ribosomal L39 protein 10 50 IPR000077 GO:0003735|GO:0005840|GO:0006412
Pte10g01435 52 FunFam 60S ribosomal protein-like L39 1 52 - -
Pte10g01435 52 PANTHER RIBOSOMAL PROTEIN L39E 3 52 - -
Pte10g01435 52 SUPERFAMILY Ribosomal protein L39e 4 51 IPR023626 -
Pte10g01435 52 ProSitePatterns Ribosomal protein L39e signature. 31 47 IPR020083 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01435 3 53 Cytoplasmic Ribosomal Protein Gene Family AT4G31985 92.157 1.20e-29 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01435 K02924 - gmx:100779071 109.383