Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01429 ATGCAAGCCTCCATCCAGCAACAAAATGGACTCCTCCAAAATAAACTGACACCATTTCTTTCACTAAGTACAATTGTCTCTCTTTCTTCCATACTGCAAGTTCCAATGGAGATTCTAAAATTCTTGTACTTCAATCTTTTCATGGCTTCAGTTTTTTTAACAGTTTCAGCAATTGACCCCTACTCAAAAGCACTCCTGAGTTTAAAATCTGAGCTTGTTGATGAATACAATGGTTTAAAAGACTGGCTTGTGCCTTCTAGTGGGAATCCAACAGAAAAACCTTACGCTTGTTTCTGGTCAGGTGTCAAATGCAACAACAATTCAACCCATGTTATTGCTTTAGACCTCTCCATGAAGAATTTGGGGGGAGTGATGTCTGGCAAGCAATTCAATGTCTTCACTGAGCTTACTGAACTCAACTTGAGTTATAATTCCTTCTCTGGACAACTTGCAGTAGGAATTTTCAACCTCACTAACCTAAAAAGCTTGGACATCAGTAGAAACAACTTCTCTGGCCATTTCCCCGGTGGGATTTCTGGTTTGCAAAATTTGATTGTCTTTGATGCGTTTAGCAATAGTTTTGAAGGACCACTACCAGTCCAAGTTTCACAGCTTGGAAATCTAAAGATTCTAAACCTCGCAGGGAGCTATTTCGAAGGACCAATTCCTTCAGAATATGGCTCTTTCAAGAGCCTGGAGTTTATTCATCTTGCTGGAAATTTACTCTCCGGAAACATACCCCCAGAACTGGGGAATCTCAAAACTGTGACTCATATGGAGATTGGCTACAACTCCTACAATGGGTTTATTCCTTGGCAGTTGGGCAACATGAGTGAGCTCCGGTATCTTGATATAGCTGAAGCAAATTTGTCAGGCACGATCCCCAAGCAATTCTCCAATCTCACAAAGTTGCAGACACTTTTTCTCTTCAAAAACTATCTCACAGGATCAGTGCCAGAGGAACTTGGCACTATAATACCTCTTACAAATTTGGATCTTTCTGACAATCTTATCTCCGGGTCTATCCCTGAGAGCTTCGTGGAGTTGAAGAACCTACGACTGCTCAGTCTCATGTACAATGATATGAGTGGCACTGTCCCTGAGGTCTTAGCACAGTTGCCATCACTGGAAACTCTTCTCATTTGGAACAACTTCTTCAATGGCTCTCTGCCAAAGAGCTTAGGCAGGAATTCAAAACTCAAGTGGTTAGATGTTTCTACAAACAATTTTGCTGGCAGCATTCCACCAGATATTTGTGCGAGAGGAGAATTAACCAAGTTGATATTGTTTTCAAATGATCTTAGTGGTGATCTTCCGCAATCTCTTTCCAACTGTTCTTCCCTCGTTCGTCTTAGACTTGAAAATAATTCTCTCTCCGGGAAGATTAACTTGAAATTCAACAATCTCCCAGATATTTCATATGTTGATCTGTCCTCCAACAAGTTTAATGGCGGAATCCCATCAGATGTATGCCAAGCAGGAAAGCTTCAATATTTTAATGTCTCTAATAATCCAACCCTGGGGGGCATGATTCCTGATCAAACATGGTCACTTCCAGAGCTTCAAAATTTTTCAGCATCCTCTTGTGGAATTTCAGGCAACCTTCCTTCATTTGATTTGTGCAAATCACTAACAGTTATTGACCTTGACCACAATAATTTATCAGGAAGTGTCCCAAGAACCTTTTCCAATTGCCAAACTCTTGCAAGTTTGGACTTATCGCACAATAATTTATCAGGGTATGTTCCGGAGGAGCTTGCAAGTCTTCCTGCCCTTGGCATTGTGAACCTCTCACATAACAATTTTGATGGCCAAATACCAGAAAAGTTTGGAACTTCCTCAAGTTTAGTACTTCTCAATGTCTCTTTCAACCAGTTATCTGGTTCAATTCCCAAAAATAAACTCTTCCGTTCAATGGATTCCAGTGCATTTGTTGGAAACCCAAAACTGTGTGGAGCACCTTTGGGACCATGTCCCGATTCAGTTGCAATAATAGGAAGCAAAGGCACAAGAAAGCATGGTCGAATCATCCTACTCTGTGCAGGGATACTTCTAATTCTTGCAGCATCAGTGCTTGCAATGATAGTTTATACCCGAAGAGGAAGTAACAATCAATGGAAGATGGTCTCCTTTGCTGGACTCCCTCAATTCACAGAAAATGATGTTTTAAGAAGCATCAGTCCTGCAGAATCGACTGAATTGAGAGCACTATCACCTTCGGTTTGTAAAGCAGTACTTCCCACAGGAATACCTGTTCTAGTAAAACATGTCGAAGGGGAAGCTAAGAGCATGCAAATCATGAAAGAATTCATCACCAGACTTGGCAATGCAAGGCAAAAAAATTTAATTAGGTTATTGGGTTTCTGCTACAACAAGCATCAGGCTTATCTCATATATGATTACTTGCCCAATGGCAATTTATCTGAGAAAATTGCAATGAAGAAGGATTGGGCAGCCAAGTATAGAATCATAATTGGAATTGCAAGAGGACTTAGCTTCCTTCATCATAATTGTTACCCTCCAATATCCCATGGAGATTTAAAGTCAAGCAACATTTTGTTTGATGAATACATGGAACCATATTTGGCTGATTATGGATTCAAAAATTTGTCGCGGTTTTGCGCAGATTCAACTCCAGCGCCAGGTTCTAAATGGGTAACAGGTGAGGTCAAAGAAGCTGTACAAGAAGAACTCTGCATGGATGTCAAGAACTTTGGGGGCCTAATTTTGGAAATCTTGACAGATGGGAAGTTGCCAAGTCAATTGACAAGCATACACAGCGGTTCAAGGGAGGCTCTTCTGAGAGATATTTGCAGTGCGAATGGTGTGGATACTACGAGCTCAGTGAAGGAGGAGATAAAACTAGTCCTTGAAGTCGCATTGCTTTGCACTAAAAGCAAGTTGTTAGACAGGCCATCCATGGAAGAAATATTAAAGCGTTTATCAGCATTGAAGCAAAAAGAAGACGGCAGAATTTCTAAAATGGGAAGGCAATAG 2997 0.4081 MQASIQQQNGLLQNKLTPFLSLSTIVSLSSILQVPMEILKFLYFNLFMASVFLTVSAIDPYSKALLSLKSELVDEYNGLKDWLVPSSGNPTEKPYACFWSGVKCNNNSTHVIALDLSMKNLGGVMSGKQFNVFTELTELNLSYNSFSGQLAVGIFNLTNLKSLDISRNNFSGHFPGGISGLQNLIVFDAFSNSFEGPLPVQVSQLGNLKILNLAGSYFEGPIPSEYGSFKSLEFIHLAGNLLSGNIPPELGNLKTVTHMEIGYNSYNGFIPWQLGNMSELRYLDIAEANLSGTIPKQFSNLTKLQTLFLFKNYLTGSVPEELGTIIPLTNLDLSDNLISGSIPESFVELKNLRLLSLMYNDMSGTVPEVLAQLPSLETLLIWNNFFNGSLPKSLGRNSKLKWLDVSTNNFAGSIPPDICARGELTKLILFSNDLSGDLPQSLSNCSSLVRLRLENNSLSGKINLKFNNLPDISYVDLSSNKFNGGIPSDVCQAGKLQYFNVSNNPTLGGMIPDQTWSLPELQNFSASSCGISGNLPSFDLCKSLTVIDLDHNNLSGSVPRTFSNCQTLASLDLSHNNLSGYVPEELASLPALGIVNLSHNNFDGQIPEKFGTSSSLVLLNVSFNQLSGSIPKNKLFRSMDSSAFVGNPKLCGAPLGPCPDSVAIIGSKGTRKHGRIILLCAGILLILAASVLAMIVYTRRGSNNQWKMVSFAGLPQFTENDVLRSISPAESTELRALSPSVCKAVLPTGIPVLVKHVEGEAKSMQIMKEFITRLGNARQKNLIRLLGFCYNKHQAYLIYDYLPNGNLSEKIAMKKDWAAKYRIIIGIARGLSFLHHNCYPPISHGDLKSSNILFDEYMEPYLADYGFKNLSRFCADSTPAPGSKWVTGEVKEAVQEELCMDVKNFGGLILEILTDGKLPSQLTSIHSGSREALLRDICSANGVDTTSSVKEEIKLVLEVALLCTKSKLLDRPSMEEILKRLSALKQKEDGRISKMGRQ* 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01429 998 Gene3D Ribonuclease Inhibitor 223 324 IPR032675 -
Pte10g01429 998 Pfam Leucine Rich Repeat 159 180 IPR001611 GO:0005515
Pte10g01429 998 SUPERFAMILY Protein kinase-like (PK-like) 740 981 IPR011009 -
Pte10g01429 998 SUPERFAMILY RNI-like 114 435 - -
Pte10g01429 998 FunFam Leucine-rich repeat receptor-like protein kinase TDR 802 989 - -
Pte10g01429 998 FunFam Leucine-rich repeat receptor-like protein kinase 58 223 - -
Pte10g01429 998 Gene3D Ribonuclease Inhibitor 326 663 IPR032675 -
Pte10g01429 998 FunFam Leucine-rich repeat receptor-like protein kinase TDR 346 660 - -
Pte10g01429 998 Gene3D Ribonuclease Inhibitor 61 222 IPR032675 -
Pte10g01429 998 FunFam Leucine-rich repeat receptor-like protein kinase TDR 224 327 - -
Pte10g01429 998 ProSitePatterns Serine/Threonine protein kinases active-site signature. 842 854 IPR008271 GO:0004672|GO:0006468
Pte10g01429 998 ProSiteProfiles Protein kinase domain profile. 706 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g01429 998 Pfam Leucine rich repeat 328 384 IPR001611 GO:0005515
Pte10g01429 998 Pfam Leucine rich repeat 543 602 IPR001611 GO:0005515
Pte10g01429 998 Pfam Leucine rich repeat N-terminal domain 63 105 IPR013210 -
Pte10g01429 998 Gene3D Transferase(Phosphotransferase) domain 1 802 996 - -
Pte10g01429 998 Pfam Protein tyrosine and serine/threonine kinase 748 981 IPR001245 GO:0004672|GO:0006468
Pte10g01429 998 SUPERFAMILY L domain-like 348 659 - -
Pte10g01429 998 SMART serkin_6 717 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g01429 998 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 267 980 - -
Pte10g01429 998 Gene3D Phosphorylase Kinase; domain 1 735 801 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01429 Pte-Chr10 32349538 32354250 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01429 37 987 Receptor kinase-like Gene Family AT5G51350 53.125 0.0 956
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pte10g01429 PK_Tyr_Ser-Thr 8.1e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01429 - - cave:132184904 1318.52