Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01418 ATGTGTATTCAGGAGGCAGAGCAAGTTGGTCTGGAGATGGATAACCCAGATAACAGGAGAAAGTCATGGCCTTCTCATTGTGACCATTTGCATTCTCACATGGAAAACTGCGATAAAGTATCTTCTTTCAATGCTTCAAGTGATCGGATCAGTGCTGGAAATTGGCTTCCTCTGGAAAGTATATGTGAAGATAAAGCGGTTATGGATAGAAAGCAGAACCTACAGAACTTTGCCCTTGATCTACGGTCTGGTGAGTGGTCAGATATTGGTGGTCGCCCCTACATGGAGGATACTCACATTTGCATCAAAGACTTAGCGAGGAACTTCGGTTCTAAAGTAGTCAGTCAAGAAGCTATATCCTTCTATGGTGTATTTGACGGCCATGGAGGTAAGAGTGCTGCAGAATTTGTACGTGATCATCTGCCCAGGATCATAGTTGAGGATGCCGATTTTCCCTTAGAGCTTGAGAAAGTGGTGACAAGGTCATATAAGGAGACTGATACTGCATTTGCAAAAAGATGCTCCCTTGAATCTTCACTCTCTTCTGGTACAACTGCACTCACAGCAGTGATATTTGGGAGGTCTTTACTAGTGGCAAATGCAGGTGACTGCCGTGCTGTATTATCGAGACATGGACTAGCCATGGAAATGTCAAAAGATCACAGGCCTTGTTGCTCAAAGGAAAGGATAAGAATTGAATCTCTTGGTGGATTTATCGATGATGATTACCTCAATGGTCAGTTAGGGGTCACTCGTGCTCTAGGTGATTGGCATCTTGAGGGAATGAAGGAAACTAATGAAAGAGGTGGACCTCTGAGTGCTGAGCCAGAACTTAAGTTGGTGACATTAACCAAAGAAGATGAGTTTTTAATAATCGGAAGTGATGGGGTTTGGGATGTGTTTAGTAGCCAAAATGCTGTAGATTTTGCTAGGAGGAGACTGCAGGATCATAATGATGTCAAACTTTGTTGCAAGGAAGTTGTTGAAGAAGCAATGAAGCGAGGTTCGACCGATAACTTGACAGTTGTGATGGTGTGTTTTCAATCTGAGCCACCCCCACCTGTGTTAGTAGAGAAGGCGAGAGTAAGAAGAAGCATTTCTGCAGAAGGGCTGCAAAATCTTAGATGCCATCTTCAAGGATAG 1143 0.4357 MCIQEAEQVGLEMDNPDNRRKSWPSHCDHLHSHMENCDKVSSFNASSDRISAGNWLPLESICEDKAVMDRKQNLQNFALDLRSGEWSDIGGRPYMEDTHICIKDLARNFGSKVVSQEAISFYGVFDGHGGKSAAEFVRDHLPRIIVEDADFPLELEKVVTRSYKETDTAFAKRCSLESSLSSGTTALTAVIFGRSLLVANAGDCRAVLSRHGLAMEMSKDHRPCCSKERIRIESLGGFIDDDYLNGQLGVTRALGDWHLEGMKETNERGGPLSAEPELKLVTLTKEDEFLIIGSDGVWDVFSSQNAVDFARRRLQDHNDVKLCCKEVVEEAMKRGSTDNLTVVMVCFQSEPPPPVLVEKARVRRSISAEGLQNLRCHLQG* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01418 380 CDD PP2Cc 82 347 IPR001932 -
Pte10g01418 380 ProSiteProfiles PPM-type phosphatase domain profile. 82 347 IPR001932 -
Pte10g01418 380 SUPERFAMILY PP2C-like 72 348 IPR036457 -
Pte10g01418 380 SMART PP2C_4 72 345 IPR001932 -
Pte10g01418 380 ProSitePatterns PPM-type phosphatase domain signature. 121 129 IPR000222 GO:0043169
Pte10g01418 380 Pfam Protein phosphatase 2C 94 339 IPR001932 -
Pte10g01418 380 PANTHER PROTEIN PHOSPHATASE 2C 69 345 IPR015655 GO:0004722|GO:0006470
Pte10g01418 380 Gene3D - 63 351 IPR036457 -
Pte10g01418 380 FunFam Probable protein phosphatase 2C 22 65 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01418 Pte-Chr10 32268439 32271511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01418 71 380 PP2C-type Phosphatase Gene Family AT2G25620 59.936 2.02e-133 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Pte10g01418 PP2C 5.8e-66 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01418 K14803 - gmx:100782648 583.178