Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01402 ATGGGTTATGCTTCAGGTAGTTCTTCACAGGATGGGAGAGATGATGACGATGAAGATGAGTACGAGGAGGGTGGAATGGGCAATCGGTTTCTGGGGTTTATGTTTGGGAATGTTGATAATTCTGGCGATCTTGATGTCGACTACCTTGATGAGGATGCTAAAGAGCATCTTTCAGCATTGGCGGATAAGCTGGGTGCATCACTGACAGAAATAGATTTGTCAGCGAAGTCTCCAAAATCAGCAGTTGATGTTGGCGAACAAGATTACGATGAAAAGGCTGAGGATGCAGTTGATTATGAAGATATTGATGAACAGTATGATGGACCAGAAGTGCAAGATGCGACTGAGGAAGACTACCTGTTGCCTAAGAAGGATTATTTTTCTGCTGAAGCTTCACTTGGCGCTCTTGAGTCAAGATCTTCTGTATTTGATGATGAGGACTATGATGAAGAGTTAAATAATGATGATGTTGATGGTGATGCTGTCAAATCATCAGAGGGTCAAATTGAGGCTAGTGCAGCTGATTGTAAAGAAGAGATAGCTCTTGACAATGACTTACATGCTGGCACCCCTCTAAGTGAAAATTTGGATGCATATTCACCAGAACAGGAATCACAGGAAGTTGTAAAAGACTCCACACCACTGCCTGTCTTATGTGTTGAAGATGGGATGGTTATCTTACGCTTCTCTGAAATATTTGCTGTCCATGAACCCTTGAAGAGATCTGAAAAGAGAGAGCATCGGTATTCAATTCCAAAGGATAGGGGTGAGTCTTTGGATGTATCTGATATGGTGGAAGAGGATGAAGAGGTATTTCTTAAGGAGTTTAGTCAGCATCTCTCAGTAAGTAAACCAGTTAATCAGGATGGAAAAGATGTAGCAGAGTATAACGACGATATGTCTAATGAATTTTCAAAATTTGGTGAACTGCAAGGGGCTTTCCCATTGGATTTAAAAGATGGCTGTCCAGAAAAGGAGTCTTGTCTCTGCGCAGAACCTATGAAAGCAGGTTCTTTGGAGGATCTTTATTTGGAAAGGCTTTCTTTGTCAGATGCTGAATTTTACATGTTAGATCAGGCAAACTGGGAAGATGAGATTATTTGGGGCAATTCTTCAGCGCTAACTGAAAATAATGTGGATAGGTGTGAAATTTCTGGGTCTGAATTGGGTGCTTTGGTAATCGGTGAGGTGGAAAGTGAGACTAAACTGCAACATCTTGAATCAGATGCCCATAGGAATCTGAATGAAAAAGGTCATGATTATTTCTCTTTTAGGTCGTTTGCCTCATTGGAGTCCTTTGCAACAGGAGATTCCTCGGAACTGGTAACAAGTACTTGCTCAGATAACTTATTTCATCCCCAACTATTGAGGTTAGAATCGAGACATGATATTGATAGCTCTGATTGTGCTGATGGGAAAAAGGAGAGAACGGGTTGGGAGATAATGCAAGTTAATGCTCCAAGGCGTTTTACCCAGCTTGCTACACAAAACAGAGACATGGTTGATGGTTCATGGTTGGAAAAAATAATTTGGGAAGAAGATAAATCTGCTGTTAGACCAAAACTAATTCTTGATCTTCAAGATGATAAGATGCTTTTTGAAGTCCTAGATGATAAAAGCAGTAATATTCTTCATCCTGGTGCTATGGTCATAACTCGACCCCTGAAGTTGAGTAATGGGGAAACTTGTGAGCTCCTAGGTCATGGGGGATCTGGATGGCGTCACGTTGCTAACGACAAACATTATTCGAACAGGAAATCCTCTCAGCAACTGAAATCTAATTCTAAAAAGCGCTCTGCTCATGGTATCAAAATTTTTCATTCACAGCCTGCTCTGAAGCTACAGACAATGAAGCTAAAACTAAGCAATAAAGATATTGCGAATTTTCATCGGCCAAAGGCTTTGTGGTATCCTCATGACAATGATGTGGCTGTAAAAGAACAAGGGAAGCTCCCAACTCAAGGACCCATGAAAATCATAATGAAAAGCTTGGGTGGCAAGGGGACTAAACTGCATGTTGATGCAGAAGAAACTATTTCTTCTGTCAAAGCAAAAGCTTCAAAAAAACTAGATTTCAAGCTGTCAGAATCAGTAAAACTATATTATTTGGGAAAGGATCTGGAAGATGATAAATCACTTTCTGCTCAAAGTGTCCAACCGAACTCTGTGCTTCATCTTGTTCGTTCAAAGATACATTTATTGCCAAGAGCACAGAAGGTTCCTGGGGATAACAAGTCCTTACGTCCTCCTGGTGCATTTAAGAAGAAGTCTGATCTATCTGCAAAAGATGGTCATGTATTTCTCATGGAATACTGTGAGGAAAGACCTTTGCTGCTGAGCAATGTTGGCATGGGTGCTAGACTTTGCATGTACTACCAGAAATCATCTCCAGATGATCAAAATGGCTTGGTACTTCGCAGTTCCAATAATAGCTTGGGGCATATGGTTTCTTTGGATCCTTCAGATAAATCCCCTTTCCTTGGAGATCTAAAACCTAGTTGCAGTCAGTCTTCGCTGGAAACTAACATGTTTAGAGCACCCATCTTTCCTCATAAAGTAGCAACGACAGATTATCTGTTGATTCGATCTCCAAAGGGAAAGCTTTCACTGAGACGCATTGACAAGATTCACGTGGTTGGACAGCAGGAGCCTTTGATGGAGGTACTATCACCTGGAAGTAAGAATCTCCAGACATACATGCTGAATAGGCTATTGGTGCATATGTGCCGAGAGTTTCAAGCAGCAGAGAAGCGTCAATTGCTTCCCTCAATACGTGCTGATGAGTTACGTGCACAGTTTCCATACTTACCAGAAGCTTCATTCCGGAAAAGAATCAAGGAATATACCAATTTGCAGAAGGGAACCAACGGGCAATGGAATTTAGTTAAAAAGCGAAATTTCCGCATGTGGTCTGAGGATGAATTGAGGAAAATGGTGACACCTGAGCTTGTGTGTGCCTATGAAAGTATGCAAGCTGGTTTATACCGGCTAAAGCATTTGGGAATTACAGAAACACATCCAACTAATATCTCTTCAGCAATGAGTCGGCTTCCCGATGAAGCCATAGCCCTGGCTGCTGCATCGCACATTGAAAGAGAACTGCAAATTACCCCATGGAACTTGAGTAACAACTTTGTTGCCTGTACCAGTCAGGGAAAGGAAAATATTGAGCGACTAGAAATTAGTGGTGTGGGTGATCCATCTGGTCGAGGCTTGGGATTTAGTTATGCCCGAGCCCCTCCAAAGGCACCAGTTTCAAATGCAATGACAAAGAAGAAACCAGTCCCTGGCAGAGTAGCTTCTACTGTCACAGGAACTGATGCCGATCTACGAAGGTTGAGCATGGAAGCTGCACGAGAGGTCCTCCTTAAGTTTAATGTTCCCGAGGAGGTGATTACAAAGCAGACAAGATGGCATCGCATTGCTATGATACGGAAACTGTCAAGTGAGCAAGCTGCATCTGGAGTCAAGGTTGATCCAACAACTATTGGTAAATATGCACGTGGGCAGCGGATGTCTTTCCTTCAGCTGCAGCAGCAGACAAGGGAGAAGTGTCAGGAGATCTGGGATCGACAACATCAGAATCTTTCTGCTATAAATAATGAAGAACACGAGAGTGACTCAGATGAACATAGTGATCTGGATTCCTTTGCGGGAGATCTGGAAAATTTACTTGATGCTGAAGAGTATGAAGAAGGAGCTGAGGGTAACAACGAATCAAAACGAGAAAAAGCAGATGGTGTTAAAGGTCTGAAGATGAGGGGGCGCCCATCCTTGACTCAGGCAGAAGAGGAAATGGAGGATGAAGCTGCTGAAGCAGCTGAGTTGCGTCGGTTGCTTATGGATGATGATGAAGATGGCAAGAAGAAGAAGAAAAAGACAAAGGAAGTGGGTTTGGTTCCAAAACTCAAGTCAAATTTTGTTGTTGATAGTACAGACCATGTGCAACAGGTAGTTAGTCCTGTACAAAGGGAAGTAGTTTCCCATTTGAAAGAGAGCACACTCACGGAGTCCAAGGAGGGAGGAAATCTAGCCCTTAAAGGAATGAAATTGGTGAAGGTAAAATCATTGAAGAAGAATGTGAATGTGCCCATGGATTTTCAAAATAAGAAAATAAAAATTGCTGGGGATGGAGTCAAGGTAATTGAGCAGCAGAATTTTTCTCATTCTTCTTACTCTTCCGCTTCATTTAGATTTTGCCCTAGTCCTAGTATCTCAAATATGATGCATGTTTTTTTCATGTTCCAACTGGGTCACATGGGAACCAACAAGAATTGCTTGAAATATACCGATGATCAAGAACCCCTGATTGAATCAACAGATCTGGAAAAAGCATCTGGAAAGTCCAGCTCATTGGATCTCTCAAATCAGCCCCTCCAAAAGAACCAACCAAGAGCGGACGAATCAATGATCGATTCTCATAAGCCGTCAGTGGTTATAAGACCCCCTATAGATGGTGGAAGGGGGCAAATTGAATATCATAGGCCCTCAGTAGTGATAAGGCCAGTATCAAGTGCAGGGAAAGATCAGTTGGAATCTCATAGGCCGTCCATTGTGATTCGTCCACCTTCAGAAGTAGATAGGGAGCAGTCTCAGAAAAAAATCATTATAAAACGTCCAAAGGAAGTTATGGATGTGGATCAACACAGTCCAGCAGGAAACACTGATGTTGAGCCCAGAAAACTCAAAAGCATAGCTGCTTTGTCAAATGTTGAGAAGTTTAAGAGGCAGGATAGCTTTTATTCTTCTGAGTCATCTATAAAACCCAAAGTAAAAATGGACAGGCGATTGCGGGAAATGCAAGAGAAAGAGAAGCGGAGAAATGCTGTAAGACTAAAGGAGGATAGAGAAAGGAGGCTCCAAGAGGAAGAGAGGAGGATGCTTGAAGAGCAAGAAAAACTGGCTGAGATCAAAAGATATGAAGCAAACATTAGAAGGGAGAGAGAGGAAGAAGAATGGGAGAAAGCAAAGAAGAAAAAGAAAAAGCCTGAATTTGGGGATGATTATTTGGAGGATCCAAGAAGAAGAAGATATGATAAGAGGATGATTGAAAGAGATCGAAGTGCTAAGAGGAAATCAATTGTTGAATTGGGTAGGTTTGGTACTGAGCATACTCCACCAACAAAGCGCCGCAGAGGGGGAGAGGTTGGTTTGGCTAATATCCTCGAGCGTGTAGTGGAAACCCTCAAAGATAGGCAAGAGATATCTTATCTTTTCTTGAGACCGGTGACCAAGAAGGAGGCTCCTGATTACCTGGATATCATAAAGCATCCAATGGATCTTTCTACAATCAAGGAGAAGGTAAGGAGGATGGCATACAAAAACCGAGAAGATTTCCGACATGATGTATGGCAAATTACTTTCAATGCCCATCGATACAATGACGGAAGAAACCCAGGAATTCCTCCCCTTGCAGATCAGCTGTTGGAGCTCTGTGATTATTTGTTGAATGAGAATGATGAGAGCTTGACCGAAGCTGAAGCTGGCATTGAAAGCAGGGATTTTTAG 5508 0.4223 MGYASGSSSQDGRDDDDEDEYEEGGMGNRFLGFMFGNVDNSGDLDVDYLDEDAKEHLSALADKLGASLTEIDLSAKSPKSAVDVGEQDYDEKAEDAVDYEDIDEQYDGPEVQDATEEDYLLPKKDYFSAEASLGALESRSSVFDDEDYDEELNNDDVDGDAVKSSEGQIEASAADCKEEIALDNDLHAGTPLSENLDAYSPEQESQEVVKDSTPLPVLCVEDGMVILRFSEIFAVHEPLKRSEKREHRYSIPKDRGESLDVSDMVEEDEEVFLKEFSQHLSVSKPVNQDGKDVAEYNDDMSNEFSKFGELQGAFPLDLKDGCPEKESCLCAEPMKAGSLEDLYLERLSLSDAEFYMLDQANWEDEIIWGNSSALTENNVDRCEISGSELGALVIGEVESETKLQHLESDAHRNLNEKGHDYFSFRSFASLESFATGDSSELVTSTCSDNLFHPQLLRLESRHDIDSSDCADGKKERTGWEIMQVNAPRRFTQLATQNRDMVDGSWLEKIIWEEDKSAVRPKLILDLQDDKMLFEVLDDKSSNILHPGAMVITRPLKLSNGETCELLGHGGSGWRHVANDKHYSNRKSSQQLKSNSKKRSAHGIKIFHSQPALKLQTMKLKLSNKDIANFHRPKALWYPHDNDVAVKEQGKLPTQGPMKIIMKSLGGKGTKLHVDAEETISSVKAKASKKLDFKLSESVKLYYLGKDLEDDKSLSAQSVQPNSVLHLVRSKIHLLPRAQKVPGDNKSLRPPGAFKKKSDLSAKDGHVFLMEYCEERPLLLSNVGMGARLCMYYQKSSPDDQNGLVLRSSNNSLGHMVSLDPSDKSPFLGDLKPSCSQSSLETNMFRAPIFPHKVATTDYLLIRSPKGKLSLRRIDKIHVVGQQEPLMEVLSPGSKNLQTYMLNRLLVHMCREFQAAEKRQLLPSIRADELRAQFPYLPEASFRKRIKEYTNLQKGTNGQWNLVKKRNFRMWSEDELRKMVTPELVCAYESMQAGLYRLKHLGITETHPTNISSAMSRLPDEAIALAAASHIERELQITPWNLSNNFVACTSQGKENIERLEISGVGDPSGRGLGFSYARAPPKAPVSNAMTKKKPVPGRVASTVTGTDADLRRLSMEAAREVLLKFNVPEEVITKQTRWHRIAMIRKLSSEQAASGVKVDPTTIGKYARGQRMSFLQLQQQTREKCQEIWDRQHQNLSAINNEEHESDSDEHSDLDSFAGDLENLLDAEEYEEGAEGNNESKREKADGVKGLKMRGRPSLTQAEEEMEDEAAEAAELRRLLMDDDEDGKKKKKKTKEVGLVPKLKSNFVVDSTDHVQQVVSPVQREVVSHLKESTLTESKEGGNLALKGMKLVKVKSLKKNVNVPMDFQNKKIKIAGDGVKVIEQQNFSHSSYSSASFRFCPSPSISNMMHVFFMFQLGHMGTNKNCLKYTDDQEPLIESTDLEKASGKSSSLDLSNQPLQKNQPRADESMIDSHKPSVVIRPPIDGGRGQIEYHRPSVVIRPVSSAGKDQLESHRPSIVIRPPSEVDREQSQKKIIIKRPKEVMDVDQHSPAGNTDVEPRKLKSIAALSNVEKFKRQDSFYSSESSIKPKVKMDRRLREMQEKEKRRNAVRLKEDRERRLQEEERRMLEEQEKLAEIKRYEANIRREREEEEWEKAKKKKKKPEFGDDYLEDPRRRRYDKRMIERDRSAKRKSIVELGRFGTEHTPPTKRRRGGEVGLANILERVVETLKDRQEISYLFLRPVTKKEAPDYLDIIKHPMDLSTIKEKVRRMAYKNREDFRHDVWQITFNAHRYNDGRNPGIPPLADQLLELCDYLLNENDESLTEAEAGIESRDF* 1836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01402 1835 Pfam TATA box-binding protein binding 17 65 IPR009067 -
Pte10g01402 1835 Gene3D - 639 729 - -
Pte10g01402 1835 Coils Coil 1259 1283 - -
Pte10g01402 1835 MobiDBLite consensus disorder prediction 1230 1270 - -
Pte10g01402 1835 Pfam Bromodomain 1722 1797 IPR001487 GO:0005515
Pte10g01402 1835 Gene3D - 22 71 IPR036741 -
Pte10g01402 1835 ProSiteProfiles Ubiquitin domain profile. 657 727 IPR000626 GO:0005515
Pte10g01402 1835 SUPERFAMILY TAF(II)230 TBP-binding fragment 24 62 IPR036741 -
Pte10g01402 1835 Pfam Protein of unknown function (DUF3591) 576 1143 IPR022591 -
Pte10g01402 1835 Pfam Ubiquitin family 661 730 IPR000626 GO:0005515
Pte10g01402 1835 MobiDBLite consensus disorder prediction 1443 1466 - -
Pte10g01402 1835 SMART bromo_6 1711 1821 IPR001487 GO:0005515
Pte10g01402 1835 MobiDBLite consensus disorder prediction 88 111 - -
Pte10g01402 1835 ProSiteProfiles Bromodomain profile. 1731 1801 IPR001487 GO:0005515
Pte10g01402 1835 SMART ubq_7 657 729 IPR000626 GO:0005515
Pte10g01402 1835 Gene3D - 1675 1834 IPR036427 GO:0005515
Pte10g01402 1835 ProSitePatterns Bromodomain signature. 1736 1793 IPR018359 -
Pte10g01402 1835 FunFam Transcription initiation factor TFIID subunit 1 639 729 - -
Pte10g01402 1835 CDD Ubl_TAFs_like 657 728 - -
Pte10g01402 1835 SUPERFAMILY Bromodomain 1704 1823 IPR036427 GO:0005515
Pte10g01402 1835 Coils Coil 1606 1657 - -
Pte10g01402 1835 MobiDBLite consensus disorder prediction 76 111 - -
Pte10g01402 1835 SUPERFAMILY Ubiquitin-like 650 730 IPR029071 -
Pte10g01402 1835 MobiDBLite consensus disorder prediction 1 26 - -
Pte10g01402 1835 MobiDBLite consensus disorder prediction 1442 1470 - -
Pte10g01402 1835 PRINTS Bromodomain signature 1748 1764 IPR001487 GO:0005515
Pte10g01402 1835 PRINTS Bromodomain signature 1764 1782 IPR001487 GO:0005515
Pte10g01402 1835 PRINTS Bromodomain signature 1734 1747 IPR001487 GO:0005515
Pte10g01402 1835 PRINTS Bromodomain signature 1782 1801 IPR001487 GO:0005515
Pte10g01402 1835 CDD Bromodomain 1721 1816 - -
Pte10g01402 1835 MobiDBLite consensus disorder prediction 1234 1251 - -
Pte10g01402 1835 FunFam Transcription initiation factor TFIID subunit 1 1677 1831 - -
Pte10g01402 1835 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 13 1834 IPR040240 GO:0001091|GO:0004402|GO:0005669|GO:0006366|GO:0017025
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01402 Pte-Chr10 31918893 31936656 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01402 657 727 Cytoplasmic Ribosomal Protein Gene Family AT3G62250 39.437 2.57e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01402 K03125 - gmx:100780733 2169.04