Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01401 ATGGGGGCGGCAATTTTGCCAGATCTTGGTACAGATATACTGATTCCTGTATGTGCAGTTGTCGGTATCGTGTTTGCTCTGGCACAGTGGTATCTGGTATCGCAGGTCAAGCTTTCACCAGGGAGAGACGCTTCTGGTGGGAAGAATGGGTATAATGATTCTCTCATTGAAGAAGAAGAGGGTATCAATGATCATAACGTTGTGATGAAATGTGCTGAGATTCAAAACGCTATATCTCAAGGAGCAACCTCCTTTCTCTTTACTGAGTATAAGTATGTGGGCATATTCATGGTGGCTTTTGCCGTCTTGATATTCGTTTTCCTTGGCTCTGTGGAGGGATTTAGCACAAGTCTCCAGGTGTGCACATATGACAAAACTAAGATGTGTAAACCTGCTCTTGCAACAGCTGTCTTCAGTACCATATCCTTCTTGCTTGGCGCTGTCACATCAGTTGTTTCTGGGTTCCTTGGAATGAAAATTGCAACCTATGCAAATGCAAGGACAACACTTGAGGCACGAAAGGGTGTTGGAAAGGCTTTCATTACTGCGTTCAGATCTGGTGCTGTCATGGGTTTTCTCCTTGCTGCTAATGGTCTATTGGTTCTATACATTGCTATTAATCTTTTCAAGATATATTATGGTGAAGACTGGGGAGGCCTTTTTGAGTCCATTACTGGTTATGGTCTTGGTGGATCATCAATGGCTTTGTTTGGAAGAGTGGGCGGAGGGATCTATACTAAGGCTGCTGATGTTGGTGCTGATCTTGTTGGCAAGGTGGAGAGAAATATTCCTGAGGATGACCCCAGGAATCCAGCTGTGATAGCTGATAATGTTGGTGATAATGTTGGAGATATAGCTGGTATGGGATCTGATCTTTTTGGATCATATGCCGAGTCATCATGTGCTGCACTTGTCGTTGCTTCCATCTCATCTTTTGGCAACAACCATGAGTTCACCCCAATGTTATATCCTCTCATTGTCAGTTCTGCTGGCATCATTGTATGTTTGCTTACCACATTGTTTGCAACTGATTTCTTTGAAATCAAAGCTGTTGAGGAAATTGAGCCAGCATTGAAGAGGCAGCTTATCATTTCAACAGTCTTCATGACTATTGCTATTGCAATTGTAAGTTTCATTGCACTTCCTTCTTCCTTCACTATATTCAACTTTGGAGAGCAGAAAGAGGTGCAGAATTGGCAGCTGTTCCTATGTGTTGCTGTTGGTCTGTGGGCAGGGCTTATTATTGGATTTGTAACAGAGTATTATACCAGTAATGCATACAGCCCTGTGCAAGATGTTGCTGATTCCTGTAGAACTGGTGCTGCCACTAATGTGATTTTTGGCCTTGCTTTGGGATACAAATCTGTCATCATTCCAATATTTGCTATTGCCATTAGCATTTTTGTCAGTTTTAGCTTTGCTGCCATGTATGGCATTGCTGTAGCTGCTCTTGGAATGTTGAGTACCATAGCTACTGGACTGGCTATTGATGCATACGGTCCCATCAGTGATAATGCTGGAGGAATTGCTGAGATGGCAGGCATGAGTCACAGGATCCGTGAGAGAACTGATGCACTTGATGCAGCGGGAAACACAACTGCGGCTATTGGAAAGGGATTTGCAATTGGCTCCGCTGCACTTGTATCCCTGGCCCTTTTTGGCGCCTTTGTAAGCCGAGCTGCCATTTCAACAGTTGATGTGTTGACTCCAAAGGTTTTCATTGGCTTGATTGTTGGAGCCATGCTTCCATATTGGTTCTCGGCCATGACTATGAAGAGTGTGGGTAGTGCAGCTCTAAAGATGGTTGAGGAAGTGCGAAGACAATTTAATACCATTCCAGGTCTTATGGAAGGCACTGCCAAGCCTGATTATGCTACTTGCGTTAAGATCTCAACTGATGCCTCCATCAAAGAGATGATACCACCTGGTGCCCTGGTAATGCTCACACCCCTTATTGTTGGGATATTTTTCGGCGTTGAAACCCTCTCAGGAGTTCTTGCTGGATCCCTTGTCTCTGGTGTACAGATTGCCATCTCTGCATCTAATACTGGCGGTGCTTGGGATAATGCCAAGAAGTACATTGAGGCTGGTGCATCAGAGCATGCTAGAAGCCTTGGTCCAAAAGGATCTGATCCGCACAAGGCAGCTGTCATTGGTGACACTATTGGTGATCCTCTCAAGGATACATCTGGACCATCACTCAACATTCTCATCAAATTGATGGCGGTTGAGTCGCTTGTTTTTGCCCCATTCTTTGCAACACATGGTGGCTTGCTCTTCAAGATCTTCTAG 2292 0.4455 MGAAILPDLGTDILIPVCAVVGIVFALAQWYLVSQVKLSPGRDASGGKNGYNDSLIEEEEGINDHNVVMKCAEIQNAISQGATSFLFTEYKYVGIFMVAFAVLIFVFLGSVEGFSTSLQVCTYDKTKMCKPALATAVFSTISFLLGAVTSVVSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKIYYGEDWGGLFESITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGNNHEFTPMLYPLIVSSAGIIVCLLTTLFATDFFEIKAVEEIEPALKRQLIISTVFMTIAIAIVSFIALPSSFTIFNFGEQKEVQNWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAISIFVSFSFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAAISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARSLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKIF* 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01401 763 PIRSF H+-PPtase 11 761 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Pte10g01401 763 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 9 753 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Pte10g01401 763 Pfam Inorganic H+ pyrophosphatase 23 748 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Pte10g01401 763 NCBIfam V-type H(+)-translocating pyrophosphatase 11 758 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Pte10g01401 763 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 6 753 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01401 Pte-Chr10 31868550 31872761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01401 4 626 Primary Pumps ATPases AT1G15690 86.645 0.0 1097
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01401 K23025 - gmx:100775864 1375.92