Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01395 ATGAGTATTCTATTGAGGATGGGTATTCTTGCAGCTTCTTTGTTGATCTTATTGCAAGTGCCAGTGATACTAGGTTCTGAATTTTTCTCTCTATCAAATTATTGCGGTGATGGTCATATTGCCTTTTCAAGTTCTCTTGGTGAAAAAATGTTTTACATAAATGGAAAGACCACTGACAGAGTTAGATTCTGTAAGGCCCTTCAGTTCTATCTTGCTAATGGTTGCGGTTTTGGGAATGAACTTGGAAGTGATATCTGCGATGCTGAACATTCATCTGTTGATTTGCTCTTAAAGGCTGGAAGAAAACTTCTACAGATGGAGTCTGAAGTTGAACCTGCATTTGAGGGCCATTTCAATGTCCACAAATCTGCGTCCATCCGAACACCTTTCATAGCAGCAAGCGGATTTTTGCTTGTCTGCTGCGCTTTTCTGTTCCCTTGTCTATACAGGAAACGGAAGGCGACTGGTCATACTGTTCTGTCGAAGGACTCAATTTCACTGGATTCAACTTCATCAGCGGATATGAACTCTGTTTCTGACAAGATACCTGCCAGTCCCTTTCGTGTGCCTGCCAGTCCCTTCCGTGTGCCTGCCAGTCCTTCAAGATTTTCAAATTCTCCACGACTGAGTAGACTTGGATCAATACACCTCAACTTGCATCAGGTTACTAGAGCTACTCGGAATTTCTCATCTGCATGTCAAATAGGGGAAGGAGGTTTTGGGACTGTGTACAGGGCTCAGTTGGAAGATGGCAATGTTGTTGCCATAAAACGCGCAAAAAAGGAACAATTTGAGAATCTACAAAAAGAATTCAGCAGCGAAGTTGAACTTCTGGCCAAAATAGATCACCGTAACCTAGTGAAGCTGCTAGGCTATATTGAAACAGGAAATGAACGGCTTATTATAACGGAGTATGTACCAAATGGTACCCTTAGGGAACATCTGGATGGCCAACGGGGAAGAATTTTGGATTTCAACCAACGGCTTGAAATCTGCATTGATGTGGCTCATGCCCTGACGTATCTCCATCTCTATGCAGAAAAGTCAATCATTCATCGAGACGTGAAATCATCCAACATTCTTCTGACAGAAAGCATGAGAGCCAAAGTGGCTGATTTTGGATTTGCAAGGCTTGGTCCTGGAGAGTCTGACCAAACACACATTTCTACGAAAGTGAAAGGAACAGTTGGTTACTTGGACCCTGAATACATGAAAACATATCAGCTCACAACCAAGAGTGACGTTTACTCCTTTGGAATCTTGCTTCTTGAAATTGTGACTGGTCGCCGACCGGTAGAGTTGAAAAAACCAGTTGAAGAGCGGGTCACACTGAGATGGGTTTTCAATAAATACAATGATGGAAGAGCAGTGGAGCTGTTGGATCCGTTAATGGAGGAAAAAGTGAACCCAAAGATTATTTTGAAGATGTTTCAATTGGCGTTCCAATGTGCAGCACCAATTCGAACTGATCGACCGGACATGAAAGCTGTTGGAGAGCAGTTGTGGTCAATAAGGGCAAACTATCTCAAGGAACCAAAAATAGAGAACTAG 1551 0.4275 MSILLRMGILAASLLILLQVPVILGSEFFSLSNYCGDGHIAFSSSLGEKMFYINGKTTDRVRFCKALQFYLANGCGFGNELGSDICDAEHSSVDLLLKAGRKLLQMESEVEPAFEGHFNVHKSASIRTPFIAASGFLLVCCAFLFPCLYRKRKATGHTVLSKDSISLDSTSSADMNSVSDKIPASPFRVPASPFRVPASPSRFSNSPRLSRLGSIHLNLHQVTRATRNFSSACQIGEGGFGTVYRAQLEDGNVVAIKRAKKEQFENLQKEFSSEVELLAKIDHRNLVKLLGYIETGNERLIITEYVPNGTLREHLDGQRGRILDFNQRLEICIDVAHALTYLHLYAEKSIIHRDVKSSNILLTESMRAKVADFGFARLGPGESDQTHISTKVKGTVGYLDPEYMKTYQLTTKSDVYSFGILLLEIVTGRRPVELKKPVEERVTLRWVFNKYNDGRAVELLDPLMEEKVNPKIILKMFQLAFQCAAPIRTDRPDMKAVGEQLWSIRANYLKEPKIEN* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01395 516 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 117 507 - -
Pte10g01395 516 SMART serkin_6 229 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g01395 516 Gene3D Transferase(Phosphotransferase) domain 1 306 514 - -
Pte10g01395 516 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 306 515 - -
Pte10g01395 516 FunFam Putative LRR receptor-like serine/threonine-protein kinase 208 305 - -
Pte10g01395 516 CDD STKc_IRAK 235 501 - -
Pte10g01395 516 ProSitePatterns Serine/Threonine protein kinases active-site signature. 350 362 IPR008271 GO:0004672|GO:0006468
Pte10g01395 516 Pfam Protein tyrosine and serine/threonine kinase 233 501 IPR001245 GO:0004672|GO:0006468
Pte10g01395 516 Gene3D Phosphorylase Kinase; domain 1 200 305 - -
Pte10g01395 516 ProSitePatterns Protein kinases ATP-binding region signature. 235 261 IPR017441 GO:0005524
Pte10g01395 516 SUPERFAMILY Protein kinase-like (PK-like) 212 504 IPR011009 -
Pte10g01395 516 ProSiteProfiles Protein kinase domain profile. 229 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01395 Pte-Chr10 31831898 31836956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01395 193 515 Receptor kinase-like Gene Family AT3G46290 41.337 8.81e-74 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Pte10g01395 PK_Tyr_Ser-Thr 1.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01395 - - qsa:O6P43_002448 690.649