Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01384 ATGGAATTTGAGGAGCAAGAGGAAGAGATGGCCATGGAAACTGAGAGTTACGACTCGTTGGGTATCTCCACCGGGGTGAAAATGCCAAGGTCTGGGGGACCTGGTGTGTGCTTGTCAGCTCAACCAATTAGGAATAATAACTTGATAAACGGCAATACCATGAACTGTGGCGGCAATAACAAGCCCAGGTACAGGGAGTGCTTGAAGAACCATGCGGTGGGTATGGGTGGGCACGCCCTTGACGGCTGCGGAGATTTCATGCCAGCCGGAGCTGAAGGTACACTTGATGCTCTCAAATGCGCAGCGTGCAGTTGCCACCGGAATTTCCACCGGAAAGAAACTGACAAAGGCAGTGTTGCTGGAGTCGGATACGGGATCGGACCCACAGACCCGTATTTGGTGACCCACCATCTCCCACCTCAGTTTGCACCCTATTATAGAACTCCAGCGGGATATCTCCACGTAGGTGGGCAGCAGAGAGGTACTATGCTGGCTTTGCCTTCAACATCCGGAGGAGGTGGAGGCGCCGGTGGCACACAGAGCACGAGGGAGCTGGACCAAGAGGATGTATCAAACCCAAGTTCTGGAAGCGGGTCAAAGAAAAGGTATAGGACTAAGTTCTCACTAGAGCAGAAGGAGAAGATGCTGGACTTGGCTGAGAAGTTGGGATGGAGAATACAGAAGCATGACGAAGCTGTGGTCCGGCAGTTCTGCAATGACTATGGGGTCAAGCGTCACGTGCTTAAGGTTTGGATGCATAACAACAAACATACTGTGGGAAAGAAGCCCTAG 792 0.5215 MEFEEQEEEMAMETESYDSLGISTGVKMPRSGGPGVCLSAQPIRNNNLINGNTMNCGGNNKPRYRECLKNHAVGMGGHALDGCGDFMPAGAEGTLDALKCAACSCHRNFHRKETDKGSVAGVGYGIGPTDPYLVTHHLPPQFAPYYRTPAGYLHVGGQQRGTMLALPSTSGGGGGAGGTQSTRELDQEDVSNPSSGSGSKKRYRTKFSLEQKEKMLDLAEKLGWRIQKHDEAVVRQFCNDYGVKRHVLKVWMHNNKHTVGKKP* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01384 263 SUPERFAMILY Homeodomain-like 189 261 IPR009057 -
Pte10g01384 263 NCBIfam homeobox domain, ZF-HD class 200 256 IPR006455 -
Pte10g01384 263 Pfam ZF-HD protein dimerisation region 63 114 IPR006456 -
Pte10g01384 263 MobiDBLite consensus disorder prediction 173 202 - -
Pte10g01384 263 Gene3D - 186 260 - -
Pte10g01384 263 MobiDBLite consensus disorder prediction 163 204 - -
Pte10g01384 263 FunFam Zinc-finger homeodomain protein 2 187 261 - -
Pte10g01384 263 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 53 258 - -
Pte10g01384 263 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 63 113 IPR006456 -
Pte10g01384 263 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 64 113 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01384 Pte-Chr10 31737140 31738742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01384 61 259 ZF-HD Transcription Factor Family AT4G24660 53.769 1.44e-66 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Pte10g01384 ZF-HD_dimer 7.7e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01384 - - qsa:O6P43_025228 337.035