Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01382 ATGATCAGTGACATTCGTATGGAGCTTCAACTGGGTCTGGCTCTTCCACGCAATAGCACTCAAGGTTTCGATTTGAATTCTCATGCAAACGAGGCGGCTTCTTCTGTGAATCATAACCATCACGATGACTCTCCTCTCTCTAGTACTTGCACCTCGGATTTCAGTGGAGATACAAAATACAAGAAACGTGGTTTTGGGCGAGCATTTGAGAATCGCAATGAGGATTTTGATCATCATAGGTTTGATTGTCAGAGCGGTCTGCCTTTTCTTTCGTTGACACCAAACCAACCCAACGAGGATGACAAGTACCATCATGATTATGAAGAACACAGTGACAAAGCATCAAACTCCATGTTCGTCAAGGTCAAGATGGAAGGAGTAGCGATAGCAAGGAAAGTAGACCTTAGCTTGTATCACTCGGTCGAAAAGCTCAAGGAAACCTTGATGGACATGTTTGGGAAATGGCATGAACATCCCGATTGTTACAAACTCACTTACCAAGACATGGAAGGTGACTGGTTGCTTGCAGAAGATGTGCCATGGATGGTTTTCATCCAGTCAGTTCATCGTCTTGAATTGGTGAAGAACATGGATGGGATGAAGTGA 606 0.4406 MISDIRMELQLGLALPRNSTQGFDLNSHANEAASSVNHNHHDDSPLSSTCTSDFSGDTKYKKRGFGRAFENRNEDFDHHRFDCQSGLPFLSLTPNQPNEDDKYHHDYEEHSDKASNSMFVKVKMEGVAIARKVDLSLYHSVEKLKETLMDMFGKWHEHPDCYKLTYQDMEGDWLLAEDVPWMVFIQSVHRLELVKNMDGMK* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01382 201 Gene3D - 95 201 - -
Pte10g01382 201 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 8 198 IPR003311 GO:0005634|GO:0006355
Pte10g01382 201 Pfam AUX/IAA family 162 198 IPR033389 -
Pte10g01382 201 Pfam AUX/IAA family 99 154 IPR033389 -
Pte10g01382 201 ProSiteProfiles PB1 domain profile. 117 196 IPR000270 GO:0005515
Pte10g01382 201 SUPERFAMILY CAD & PB1 domains 111 192 - -
Pte10g01382 201 MobiDBLite consensus disorder prediction 33 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01382 Pte-Chr10 31714068 31715706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01382 99 191 B3 DNA Binding Superfamily AT2G46530 31.579 4.84e-08 50.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Pte10g01382 AUX_IAA 9.5e-12 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01382 K14484 - jre:109018168 144.05