Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01379 ATGCAATTATACTCATTGACCCATGATAGTATAACCTATAAAGGAGACATGGAAAAGAAGTGTGGGTGCTGGGCTGTTCTGAAACGTGGTATTAGAGGAGCCTGTAAGCCCTCCAACTCTAGAGACTCTCCTAATACTATCCCTCGTACTAGCCTAGTGTATGATGCAGCAACAGAAACTCGTCACCTGAATGCTAGCAACCGCGAACTATGTGCTCCCTGTGAAGCTCGACTGTCTTCTGATATTCACGATCCGCCACCAGAAGAGAATGAAGTTCGCCGCCAGCTCCTCAAATTTTCTTTTTATGAACTGAAAGCGGCAACTGGAAATTTCAGACCAGATAGTATTCTTGGGGAGGGAGGATTTGGTTACGTGTTCAAAGGATGGATTGAAGAAAATGGAACAGCCCCAGCTAAACCTGGATCTGGAATAACAGTGGCTGTGAAAAGCTTGAAGCCCGATGGTCTTCAGGGCCATAGAGAATGGGTGGCTGAGGTTGACTTTCTTGGTCAGCTTCATCATCCCAATCTTGTTAAACTCTTTGGTTACTGCAGTGAGGACGACCAGCGGCTTCTAGTCTATGAGTTCATGACCAGAGGAAGCCTTGAAAATCATCTATTTCGAAGAACCGTCCTTCTTCCATGGTCCAACAGGGTGAAGATTGCACTTGGTGCAGCAAAAGGCTTGGCTTTCCTGCACAATGGTCCAGAGCCTGTAATTTATAGAGATTTCAAAACATCCAACATTTTGCTCGATACGGAATACAATGCAAAGCTGTCAGATTTCGGTCTAGCAAAGGCAGGTCCTCAAGGAGACAAGACACATGTATCTACCAGAGTTGTTGGAACCTACGGCTATGCTGCCCCTGAATATGTTATGACAGGTCACTTGACTTCTAAAAGTGACATTTATAGTTTTGGGGTTGTCATACTGGAGATACTGACTGGACGAAGGTCAATGGACAAGAAACGACCAAGTGGAGAACAGAATCTTGTTACATGGGCTCGCCCATACTTAGCTGACAAGCGTAAACTCTACCAACTCGTCGATCCTCGCTTAGAATTAAACTATTCTGTTAAAGGGGTGCAGAAAATTTCTCAGCTAGCTTACAGCTGTCTCAGTAGAGACCCCAAGTCCCGGCCTAACATGGAGGATGTTGTGAAGGTTCTCACCCCATTGCAGAATCTTCACGACTTTGCCATTTTGACTTACCACTCTCGTTTGTCTCAACATGGAAGACGAAAGAAGAAGCAGGGGGGGACTCCTCAACTGACACGCCAGTATTCTAAAAGCATAAAGGATTCCCCATTGAATACCGGTAAGAATCAAGGATGA 1335 0.4532 MQLYSLTHDSITYKGDMEKKCGCWAVLKRGIRGACKPSNSRDSPNTIPRTSLVYDAATETRHLNASNRELCAPCEARLSSDIHDPPPEENEVRRQLLKFSFYELKAATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLFGYCSEDDQRLLVYEFMTRGSLENHLFRRTVLLPWSNRVKIALGAAKGLAFLHNGPEPVIYRDFKTSNILLDTEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDIYSFGVVILEILTGRRSMDKKRPSGEQNLVTWARPYLADKRKLYQLVDPRLELNYSVKGVQKISQLAYSCLSRDPKSRPNMEDVVKVLTPLQNLHDFAILTYHSRLSQHGRRKKKQGGTPQLTRQYSKSIKDSPLNTGKNQG* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01379 444 CDD STKc_IRAK 117 393 - -
Pte10g01379 444 Gene3D Transferase(Phosphotransferase) domain 1 197 407 - -
Pte10g01379 444 SUPERFAMILY Protein kinase-like (PK-like) 94 397 IPR011009 -
Pte10g01379 444 ProSitePatterns Protein kinases ATP-binding region signature. 117 149 IPR017441 GO:0005524
Pte10g01379 444 ProSiteProfiles Protein kinase domain profile. 111 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g01379 444 FunFam Serine/threonine-protein kinase BIK1 79 196 - -
Pte10g01379 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Pte10g01379 444 Gene3D Phosphorylase Kinase; domain 1 79 196 - -
Pte10g01379 444 FunFam Probable serine/threonine-protein kinase PBL8 197 410 - -
Pte10g01379 444 MobiDBLite consensus disorder prediction 409 444 - -
Pte10g01379 444 PANTHER OS01G0588500 PROTEIN-RELATED 73 394 - -
Pte10g01379 444 MobiDBLite consensus disorder prediction 421 444 - -
Pte10g01379 444 Pfam Protein tyrosine and serine/threonine kinase 115 390 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01379 Pte-Chr10 31679025 31682553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01379 88 405 Glycoside Hydrolase AT3G07070 52.469 2.60e-109 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pte10g01379 PK_Tyr_Ser-Thr 8.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01379 - - aprc:113848012 768.074