Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01347 ATGTCTGTCTCTGGCTGTGCCACTCTCTCCTCCACAACTTCACAACTCAAAATCTTTCCTTCTCTCTCAACAATCAATTGTAAACTTCTAACACCACGGATTTCTGTCAAATTTTCGGACCGAAAAACCAAACGGATTAGAGCTTTTGTTGGAAAGGTTAAAGTTTCTAAAAGAGAAACTAGAATTTTGGCACAATCACAAACGACGGCTCCTACTTCCACTGAAGCTTCTATAGTGACACCTGTACCATCAGAAATGAAGTGTTGGACTTATGGAGAATATGGGGGTGTTGAGGTTTTGAAGTTTGATGATAAGGTTGCTGTCCCTGATGTGAAGGAAGACCAAGTTCTGGTTAAGGTTGCTGCTGCAGCTCTCAATCCTGTTGATGGCAAAAGGAGGCAGGGCAAGTTCAAGGCGACTGATTCATCCCTTCCTACTGTTCCAGGATATGATGTTGCTGGTGTAGTGGCAAAGGTTGGGAGTCAAGTGAAGGACTTTAAAGTGGGCGATGAAGTATATGGAAATATTAACGAGAAAGCACTAGAAGGGCCTAAACAATTTGGGTCTTTGGCTGAGTACACTGCAGTGGAAGAGAAGCTATTGGCACCAAAACCTAAGAACCTGGATTTTGCTCAGGCTGCTGCCCTTCCACTTGCAATTGAGACTGCCTATGAGGGTCTTGACAGGACTGGATTTTCTTCTGGTAAATCCATTCTTGTTCTTAATGGTTCTGGTGGAGTTGGAAGCTTGGTGATTCAGCTAGCCAAGCATGTCTTTGGTGCTTCAAGGATTGTGGCCACTTCAAGCGCTCGTCACTTGGATCTTTTGAAGAGTCTGGGTGCTGATTTGGCTATTGACTACACAAAGGAAAACTTTGAAGATTTGCCAGAAAAATTTGATGTTGTGATTGACGCTGTTGGGCAGTGTGATAAAGCTGTGAAGGTAGTGAAAGAAGGTGGCAGCGTGGCAGCACTCACCGGAGCTGTTACTCCACCAGGCTTCAGATTTGTAGTCACCTCAAATGGAGCGGTTTTGAGAAAATTAAACCCCTATCTGGAAAGCGGACAGGTGAAGCCTATAATTGATCCCAAAGGTCCGTTCCCGTTTGCACAGGTTGTGGAAGCATTCTCTTACATTGAAACCAACAGAGCCACAGGGAAGGTAGTTGTACATCCTATCCCTTAG 1185 0.4464 MSVSGCATLSSTTSQLKIFPSLSTINCKLLTPRISVKFSDRKTKRIRAFVGKVKVSKRETRILAQSQTTAPTSTEASIVTPVPSEMKCWTYGEYGGVEVLKFDDKVAVPDVKEDQVLVKVAAAALNPVDGKRRQGKFKATDSSLPTVPGYDVAGVVAKVGSQVKDFKVGDEVYGNINEKALEGPKQFGSLAEYTAVEEKLLAPKPKNLDFAQAAALPLAIETAYEGLDRTGFSSGKSILVLNGSGGVGSLVIQLAKHVFGASRIVATSSARHLDLLKSLGADLAIDYTKENFEDLPEKFDVVIDAVGQCDKAVKVVKEGGSVAALTGAVTPPGFRFVVTSNGAVLRKLNPYLESGQVKPIIDPKGPFPFAQVVEAFSYIETNRATGKVVVHPIP* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01347 394 Gene3D - 227 341 - -
Pte10g01347 394 Gene3D - 93 390 - -
Pte10g01347 394 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 79 394 IPR044626 GO:0016628
Pte10g01347 394 Pfam Alcohol dehydrogenase GroES-like domain 114 177 IPR013154 -
Pte10g01347 394 SMART PKS_ER_names_mod 95 390 IPR020843 GO:0016491
Pte10g01347 394 CDD MDR_like_2 86 390 - -
Pte10g01347 394 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 208 329 IPR036291 -
Pte10g01347 394 SUPERFAMILY GroES-like 83 240 IPR011032 -
Pte10g01347 394 Pfam Zinc-binding dehydrogenase 279 390 - -
Pte10g01347 394 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 235 256 IPR002364 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01347 Pte-Chr10 31374020 31376437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01347 113 333 Monolignol Biosynthesis Gene Families AT4G37970 24.194 6.81e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01347 K18980 - qsa:O6P43_033160 585.104