Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01345 ATGTCAGACTCGGCGCCAACGCCGAGTTCATCTGGAAACTCAACGAGCCAGGAGGAATCAAACACTATAGCTGATCAAGGCAACGTTAAAAACTCAACGGCGTCACCACCACCTGAAGAGAAAAACTCAACGGCATCACCACCACCTGAAGAAAATAAAAACTCAACGGCATCATCACCACCTGAAGAAAATAAAAACTCAACGGCATCACCACCATCCGCACCTTATAATTCTTCAGCAGCGCCTTCTACTCCATCAGCACCACCCCCACAAGCTTCAGATCAATCACCGACACCACCAGCTGCACCATCGGATTCAACACCGCGGGCTCCACCATCGAATAATACAGCACCACCCCCTGCGCCATCAAATTCAACACCACCAGCGAATCCGTCACCGCCATCATCTGGTGATGGAGGTGGTGGTGGTTCAACTCCTGCGGTAAACCCATCTCCAGGACAGAGCTTAACAAGTCCTCCTGGTTTACAACCACCTCAAAATGTGACGTCTCCGCCTTCCCCAACGAACAATTCTGGCTCACTTTCAGCACCAGTAACTGGTTCACCACCTTTAACACCTACTTTTCATCCAACAGTTCCACCACCTTCTCAATCACAAGGCACGCAGGCTCCATCCAAATCAAATCGCACGAGTAGCTCCGCCATCATTGGTAGCTCCAAATCGCAACATAATGCAATATCAGGAAATAATCTTACTGAGAAAGACAAAGCTATTATCGTTGTGGCAACAACCGGAGCTTTGCTCATTGCCTTCGTTATCCTCTTTTTCTTAATCAAAAGGTCTAAGAAACGAAACCCCTCTGCTCCTTCTGTTCCAGATGATTACTTTTATGTTCAGAATGCTCCCAAGGAAAATGCTGGTCTAAAAGATGGTTTCCATGGTGCATTGCAGAATGAAAGTCAAAGAGGGGGTGGAGTGTACCATGGATTAATGAAATTGATGTCTAATATCGGTGGCTCAACGAGTGTGTTTAGCTATGAAGAAGTGATGGAAATGACGAATGGGTTTTCTCATGAAAATGTGATTGGAGAAGGAGGGTTTGGATGTGTTTTCAAGGGTTTCCTGCATGATGGAAAACCAGTCGCTGTGAAGCAGCTCAAGGCTAGTAGTGGACAAGGGGAAAGGGAGTTCAGGGCTGAGGTTGAGATTATCAGTCGTGTTCATCATCGGTATTTGGTCTCTTTGGTTGGATATTGCATCTCTCAGAAGGAAAGATTGCTCATCTACGAGTTTGTTCCAAACAATAATCTTGAACACCACTTGCATGGAGATGGAATTCCAGTTTTGGAGTGGAGCAAGAGACTGAAGATTGCCATAGGGGCTGCAAAGGGTTTAGCATATCTCCATGATGACTGCCACCCGAAGATTATACACAGAGACATCAAATCAGCTAACATTCTATTAGACGACAATTTCGAAGCCCTGGCATGTATTCTTGATGTGGCAGACTTTGGGCTTGCCAGACTGTCAAGTGATACTTTTACACACGTTTCAACTCGAGTCATGGGGACATTTGGGTATATGGCTCCAGAATATGCATCAAGTGGAAAACTGACTGATAAATCTGATGTATTTTCATTTGGGGTTGTGCTATTGGAGCTTGTGACGGGAAGAAAGCCGGTTGATGCAGAGCAGCCCTCGGGAGATGAAAGTTTGGTTGAGTGGGCTCGTCCTCTCCTTAATCGTGCCGTGGAGAGTGGTGATTTCAGTGAGTTAGTAGATCCACGATTCGAGAAAAACTATGTTGACAGTGAGATGTCCAGAATGGTTGAGGCTGCTGCAGCATGTGTTCGATATTCTGCTCCCAGAAGACCCCGCATGATACAGGTGGTCAGAGCTTTAGATAGTAATGAGGAATTGTCTGATCTATCTAATGGGGTGAAATATGGGCAGAGTACAAGATATGATTCTGCGCAATACAATCAAGACATACAAAGATTCAGGCGGGTGGCATTCGACAGTTCCGAAGACATGTACAGTGGAGAATACGGTTCCAGATCAGATACATTACCCCCACCATCACAAGCTGGTTCAAGTACTGATCAATCAGAGAGTAGATCCTTTAATATTGACAGGTCAGGGGGCATAAGGGCATAG 2118 0.4585 MSDSAPTPSSSGNSTSQEESNTIADQGNVKNSTASPPPEEKNSTASPPPEENKNSTASSPPEENKNSTASPPSAPYNSSAAPSTPSAPPPQASDQSPTPPAAPSDSTPRAPPSNNTAPPPAPSNSTPPANPSPPSSGDGGGGGSTPAVNPSPGQSLTSPPGLQPPQNVTSPPSPTNNSGSLSAPVTGSPPLTPTFHPTVPPPSQSQGTQAPSKSNRTSSSAIIGSSKSQHNAISGNNLTEKDKAIIVVATTGALLIAFVILFFLIKRSKKRNPSAPSVPDDYFYVQNAPKENAGLKDGFHGALQNESQRGGGVYHGLMKLMSNIGGSTSVFSYEEVMEMTNGFSHENVIGEGGFGCVFKGFLHDGKPVAVKQLKASSGQGEREFRAEVEIISRVHHRYLVSLVGYCISQKERLLIYEFVPNNNLEHHLHGDGIPVLEWSKRLKIAIGAAKGLAYLHDDCHPKIIHRDIKSANILLDDNFEALACILDVADFGLARLSSDTFTHVSTRVMGTFGYMAPEYASSGKLTDKSDVFSFGVVLLELVTGRKPVDAEQPSGDESLVEWARPLLNRAVESGDFSELVDPRFEKNYVDSEMSRMVEAAAACVRYSAPRRPRMIQVVRALDSNEELSDLSNGVKYGQSTRYDSAQYNQDIQRFRRVAFDSSEDMYSGEYGSRSDTLPPPSQAGSSTDQSESRSFNIDRSGGIRA* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01345 705 FunFam proline-rich receptor-like protein kinase PERK8 419 636 - -
Pte10g01345 705 MobiDBLite consensus disorder prediction 201 234 - -
Pte10g01345 705 Gene3D Transferase(Phosphotransferase) domain 1 419 641 - -
Pte10g01345 705 ProSiteProfiles Protein kinase domain profile. 343 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g01345 705 MobiDBLite consensus disorder prediction 1 234 - -
Pte10g01345 705 ProSitePatterns Protein kinases ATP-binding region signature. 349 371 IPR017441 GO:0005524
Pte10g01345 705 MobiDBLite consensus disorder prediction 1 81 - -
Pte10g01345 705 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 253 661 IPR047117 -
Pte10g01345 705 FunFam Proline-rich receptor-like protein kinase PERK8 316 418 - -
Pte10g01345 705 MobiDBLite consensus disorder prediction 82 134 - -
Pte10g01345 705 MobiDBLite consensus disorder prediction 147 163 - -
Pte10g01345 705 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Pte10g01345 705 MobiDBLite consensus disorder prediction 665 705 - -
Pte10g01345 705 MobiDBLite consensus disorder prediction 674 697 - -
Pte10g01345 705 MobiDBLite consensus disorder prediction 172 189 - -
Pte10g01345 705 Pfam Protein tyrosine and serine/threonine kinase 346 620 IPR001245 GO:0004672|GO:0006468
Pte10g01345 705 SUPERFAMILY Protein kinase-like (PK-like) 324 621 IPR011009 -
Pte10g01345 705 Gene3D Phosphorylase Kinase; domain 1 313 418 - -
Pte10g01345 705 CDD STKc_IRAK 349 622 - -
Pte10g01345 705 SMART serkin_6 343 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01345 Pte-Chr10 31363186 31366899 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01345 171 670 Trihelix Transcription Factor Family AT1G70460 56.489 0.0 567
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pte10g01345 PK_Tyr_Ser-Thr 4.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01345 - - cave:132179339 603.979