Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01344 ATGTACTTGAGAAGAATAAATTCCAGAGGTCGAAGATGGGGTTCAGTATGCCAGCCACTGGAGTATTTTATTAGATCAAAAATCAATACTACTTGCTCTCAATCATTAGGCTGGAAACCTATCCTAAGGGAGCATTCTTCCCGAACTAGCATCATCAAAAGACATTCGCTCGATTCATTTTCAGCTCAAACTGTTACTTCTAGAAGTTCTTATTTACGTTTTCTTGCAAGGCCAAGCTCGTGTCGGATAAACACTCAGTTTTGTGCGTATAGTTCTGAAGGGGATGGAAGAAATGCAAGTGAGAACAAACATTTGTCTGAGACTAGTGGAACTGACTTTGATAAGCGAAAGGAAAGGTGGGAGAAGGTTGGGGGAAATAGCAAGCACAGTGATGCACATTCACAGCTTGGTGAACAAGATCAGAAGGAATGGCTTGACAATGAGAAGCTTGCCATTGAAAGTAGAAGGAGAGAATCTCCTTTTCTAACAAGAAGAGAGAAGTTCAAGAATGAGTTTCTAAGGAGGATCATACCATGGGAGGAAATAAATGTTGCATGGGACACATTTCCTTACTACATCCGTGAGCACAGCAAGAACCTTCTCAAGGAATGTGCTGCCTCCCATTTAAAAAATAAGAAGTTGACTATATCTTATGGTGCTCATCTGACGTCCTCCAGTGGAAGAATACTGCTTCAAAGTGTCCCTGGCACTGAGCTCTATCGGGAGCGGTTGGTGAAGGCCCTTGCACGAGAACTAAAAGTCCCTCTGCTAATGCTTGACAGCAGTATTCTTGCACCTTATGGTTTTAATGATGATATTTTATCAGAAAATGAATCAGATGATGAAAACGGTGAATCTGAGGATGTTGATAGCACGGAGTCTGAGGAGGATGTTGACAATGATGCCAGTAATGAGGAAGAATGGAATAGTAGTGCTGATGTGAAGTCAGAATGTAGTGATAATGATGAAGTTGATGTGGAGAAAGCTGCTGAAGTAGCTCTTAAGAAGCTTGTTCCTTATAACCTTGAAGATTTTGCAAAGGGAGTCCCTGTTGAGTCTGAGTCTGACTCATCAAAGTCTGAGAATGCTGAACACTCTGACAAGTGCAAACGCCAGTTGAAGAAAGGTGATCGGGTGAGATATGTTGGTCCTTCTGTTCGTGTTGAAGCTGATAACAGGGCTTTGTCAAATGGTCAGCGTGGGGAAATATATGAAGTTAATGGAGATAGGGCTGCTGTTATTTTGGATACTTGTGAAAAAGGAGTTGGAGAAGAGAAAAAAGCCAGCGAAGAAAACCAAAAACCACCAGTTTACTGGATTCATGTTAAGGACATTGAGCATGATCAGGATACAGAGACAGAAGATTGTTACATAGCAATGGATGCTCTTCGGATGGTCTTGCATTCCAAGCAACCTCTTATTGTTTATTTCCCAGACAGTTCACAGTGGTTGTCTAGGGCAGTCTGTAAATCAAGTGGAAAGGAGTTTGTTAACAAGGTGCAAGAGATGTTTGACCAGTTATCTGGTCCAGTAGTTTTGATTTGTGGGCAAAACAGAGTGGAATCTGGATCAAAGGAGAAGGAGAAATTTACAATGATACTACCAAATATCGGGAAGCTGGCTAAGCTGCCTTTTCCTCTTAACCGTTTGACTGAGGGGCTTCAAGGGGCCAAAAGATCTGATGATGATGAGATTTTCAAGCTTTTTGACAATGTTTTGGCTCTGCATCCTCCAAAGGAGGAGGATGTACTCAGAACTTTCAACAAACAGGTTGAGGAAGACAGGAAAATTGTTACAACACGTAGTAATTTAAATGAATTGCACAGGGTTCTCGAAGAGAATGGATTATCATGCATTGATCTCTTACACACAGATACCTACGGCGTTGTCTTGACGAAGCGAAAAGCAGAGAAAGTTGTCGGTTGGGCAAAAAATCATTATTTGTCGTCTTGCCTAGTTCCTTCCATAAGAAATGAAAAGTTATGTCTTCCTCGTGAAAGCCTTGAAATTGCAATTTTGCGGTTGAAGCAGCAAGAAGATGTGTCCAAAAAGCCCTCACAGAGTCTAAAAAACCTAGCAAAGGATGAGTACGAAACCAATTTCATTTCAGCTGTTGTACCTCCTGGTGAAATTGGGGTGAGGTTTGATGACGTAGGTGCTCTTGAAGATGTAAAGAAAGCACTGAATGAACTAGTTATTCTTCCCATGAAAAGACCAGAACTTTTTTCTCGAGGAAACTTGTTGCAGCCCTGCAAAGGAATTCTACTCTTTGGTCCTCCTGGAACTGGAAAAACACTTCTTGCGAAGGCACTTGCAACTGAGGCTGGAGCAAATTTTATGAGTATAACTGGTTCAACTCTTACATCTAAGTGGTTTGGAGATGCTGAGAAACTCACAAAAGCTCTTTTCTCATTCGCCAGCAAGCTAGCTCCTGTTATCATTTTTGTTGATGAAGTTGACAGTTTACTTGGTGCTCGAGGTGGTGGATTTGAACATGAAGCTACAAGAAGAATGAGGAATGAGTTCATGGCTGCTTGGGATGGGTTACGGTCGAAAGAAAGCGAAAGAATCCTCATTCTTGGTGCAACAAATAGGCCATTTGACCTTGATGATGCTGTCATCCGGCGCTTACCAAGAAGAATATACGTGGATTTGCCTGATTCTGAAAATCGTCTGAAGATTTTGAGAATAATTCTTGGAAAAGAACACTTGGAACCTGGCTTGCAGTTTGACAAGTTGGCTAGCTTGACTGAGGGATACTCCGGCAGTGATTTGAAGAACCTTTGCATCGCTGCAGCATATAGACCTGTGCAAGAACTTATAGAGGACGAAAAGAAGGGGATGGAAGGTGATGGTACGCCGGTGTTGAGGCCACTTAACTTGGATGATTTTGTTGAATCAAAATCCAAGGTGGGGCCATCAGTTGCCTATGATGCTGCTAGCATGAATGAATTGAGAAAATGGAATGAACAATACGGAGAAGGAGGAAGTAGGAGAAAATCACCATTTGGATTTGGGAACTGA 3024 0.4193 MYLRRINSRGRRWGSVCQPLEYFIRSKINTTCSQSLGWKPILREHSSRTSIIKRHSLDSFSAQTVTSRSSYLRFLARPSSCRINTQFCAYSSEGDGRNASENKHLSETSGTDFDKRKERWEKVGGNSKHSDAHSQLGEQDQKEWLDNEKLAIESRRRESPFLTRREKFKNEFLRRIIPWEEINVAWDTFPYYIREHSKNLLKECAASHLKNKKLTISYGAHLTSSSGRILLQSVPGTELYRERLVKALARELKVPLLMLDSSILAPYGFNDDILSENESDDENGESEDVDSTESEEDVDNDASNEEEWNSSADVKSECSDNDEVDVEKAAEVALKKLVPYNLEDFAKGVPVESESDSSKSENAEHSDKCKRQLKKGDRVRYVGPSVRVEADNRALSNGQRGEIYEVNGDRAAVILDTCEKGVGEEKKASEENQKPPVYWIHVKDIEHDQDTETEDCYIAMDALRMVLHSKQPLIVYFPDSSQWLSRAVCKSSGKEFVNKVQEMFDQLSGPVVLICGQNRVESGSKEKEKFTMILPNIGKLAKLPFPLNRLTEGLQGAKRSDDDEIFKLFDNVLALHPPKEEDVLRTFNKQVEEDRKIVTTRSNLNELHRVLEENGLSCIDLLHTDTYGVVLTKRKAEKVVGWAKNHYLSSCLVPSIRNEKLCLPRESLEIAILRLKQQEDVSKKPSQSLKNLAKDEYETNFISAVVPPGEIGVRFDDVGALEDVKKALNELVILPMKRPELFSRGNLLQPCKGILLFGPPGTGKTLLAKALATEAGANFMSITGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGGFEHEATRRMRNEFMAAWDGLRSKESERILILGATNRPFDLDDAVIRRLPRRIYVDLPDSENRLKILRIILGKEHLEPGLQFDKLASLTEGYSGSDLKNLCIAAAYRPVQELIEDEKKGMEGDGTPVLRPLNLDDFVESKSKVGPSVAYDAASMNELRKWNEQYGEGGSRRKSPFGFGN* 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01344 1007 Gene3D - 713 989 IPR027417 -
Pte10g01344 1007 Pfam ATPase family associated with various cellular activities (AAA) 754 884 IPR003959 GO:0005524|GO:0016887
Pte10g01344 1007 MobiDBLite consensus disorder prediction 357 374 - -
Pte10g01344 1007 MobiDBLite consensus disorder prediction 92 112 - -
Pte10g01344 1007 MobiDBLite consensus disorder prediction 274 323 - -
Pte10g01344 1007 MobiDBLite consensus disorder prediction 351 374 - -
Pte10g01344 1007 ProSitePatterns AAA-protein family signature. 857 876 IPR003960 GO:0005524|GO:0016887
Pte10g01344 1007 MobiDBLite consensus disorder prediction 274 306 - -
Pte10g01344 1007 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 166 1000 - -
Pte10g01344 1007 SMART AAA_5 750 887 IPR003593 GO:0016887
Pte10g01344 1007 MobiDBLite consensus disorder prediction 97 112 - -
Pte10g01344 1007 Pfam AAA+ lid domain 909 942 IPR041569 -
Pte10g01344 1007 Gene3D - 886 971 - -
Pte10g01344 1007 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 712 888 - -
Pte10g01344 1007 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 713 934 IPR027417 -
Pte10g01344 1007 MobiDBLite consensus disorder prediction 308 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01344 Pte-Chr10 31202167 31217534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01344 713 948 Calmodulin-binding Proteins AT3G56690 38.912 4.01e-40 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01344 - - jre:108998137 1429.08