Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01340 ATGGCTTTGTCTTCATTGCAACTTCTGCAGCTGCTTCTTGTGCTTGCTGTATTCTCAGCAAGAGAAGCTTCCGGGGTGACATTTAAGCCTTTGGGTCGTCTCAGCAATGAAATATTATCACAGCAAAGAGCAGACAGAGTGGATAGACTTCCTGGCCAGCCTGACGTGAAGTTCAAGCAATATGCAGGTTATGTCACAGTCAATAAAACTCATGGAAAAGCACTGTTCTATTGGTTCTTTGAATCCACTGAAAACCCAGAACAAAAGCCTGTGCTCCTCTGGCTTAATGGAGGTCCTGGATGTTCATCAATTGGTTATGGACAATCAGAGGAACTTGGACCATTCTTCCCACAGAACAGCATCAAACCAAAATTGAAGTTGAATCCCTTTGCATGGAATAGAGCGGCCAATCTATTATTTGTGGAATCGCCTGTTGGAGTTGGATTCTCTTACACAAACACAAGCAGCGACATTGATGAACTTGGTGACACAATTACTGCCAAAGATTCATATATTTTCCTGGTGAACTGGTTTCATCGATTCCCACAGTTTCAGTCTCATGAGTTCTACATTGCTGGTGAAAGCTACGCAGGACATTACGTTCCACAACTTTCTGAACTCATTTTTGATAATAATCAAAAGGCTAAGAAGGAAGATCATATAAACCTCAAAGGATTTATGATAGGAAATGCACTGATGGATGATGAAACAGACCAGAAAGGAATGATAGACTATGCCTGGGATCATGCAGTCATATCTGACAAATTGTACCAAGATATCAAAAGCAAATGCAATTTCAGCAATTCAAAGCTATCCAGCGATTGCAACGTACCACTGAATAAGTATTTTGATATATACAAGCTTATTGATATGTACAGCTTGTACAGCCCCCGTTGCAACGAAGATAACAACACCAATGCACTCCCTACCATCAATGGCGTTGCTCCGCATCTGTTGTCCAAATTTAAACCATGGAATCAAAGGCCAGCAGGTTATGATCCATGCGCATCAGATTACACTGAAGCTTACTTCAATAGGCCTGAAGTTCAAACGGCACTACATGCCAACATCACCAGAATTCCATATCCATGGACACATTGCAGCGACAACATTACATTTTGGAAAGATTCACCATCATCAGTACTTCCTGTCATAAAGAAGCTTGTTGCACGGGGTCTCCGCATATGGATTTATAGTGGAGATACAGATGGAAGAATTCCAGTCACTGCAACTAGATACACATTGAGAAAACTTGGTTTAAAGATTGTAGAAGATTGGACTCCTTGGTATAACAAGAAACAGGTAGGAGGATGGACAATTGTATATGATGGACTTACATTTGTGACCATTAGAGGTGCTGGTCATCAGGTTCCAACTTTTGCTCCTAGGCAAGCCCTGCAGTTGGTTAAGCACTTCCTAGCTAACAAGAAATTGCCCGAGGCAGCAGTTTGA 1452 0.4167 MALSSLQLLQLLLVLAVFSAREASGVTFKPLGRLSNEILSQQRADRVDRLPGQPDVKFKQYAGYVTVNKTHGKALFYWFFESTENPEQKPVLLWLNGGPGCSSIGYGQSEELGPFFPQNSIKPKLKLNPFAWNRAANLLFVESPVGVGFSYTNTSSDIDELGDTITAKDSYIFLVNWFHRFPQFQSHEFYIAGESYAGHYVPQLSELIFDNNQKAKKEDHINLKGFMIGNALMDDETDQKGMIDYAWDHAVISDKLYQDIKSKCNFSNSKLSSDCNVPLNKYFDIYKLIDMYSLYSPRCNEDNNTNALPTINGVAPHLLSKFKPWNQRPAGYDPCASDYTEAYFNRPEVQTALHANITRIPYPWTHCSDNITFWKDSPSSVLPVIKKLVARGLRIWIYSGDTDGRIPVTATRYTLRKLGLKIVEDWTPWYNKKQVGGWTIVYDGLTFVTIRGAGHQVPTFAPRQALQLVKHFLANKKLPEAAV* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01340 483 Gene3D - 335 372 - -
Pte10g01340 483 FunFam Carboxypeptidase 331 478 - -
Pte10g01340 483 FunFam Carboxypeptidase 41 301 - -
Pte10g01340 483 ProSitePatterns Serine carboxypeptidases, serine active site. 191 198 IPR018202 GO:0004185
Pte10g01340 483 Gene3D - 381 474 - -
Pte10g01340 483 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 46 462 IPR001563 GO:0004185|GO:0006508
Pte10g01340 483 ProSitePatterns Serine carboxypeptidases, histidine active site. 445 462 IPR033124 GO:0004185
Pte10g01340 483 Pfam Serine carboxypeptidase 52 475 IPR001563 GO:0004185|GO:0006508
Pte10g01340 483 SUPERFAMILY alpha/beta-Hydrolases 43 479 IPR029058 -
Pte10g01340 483 FunFam Carboxypeptidase 381 475 - -
Pte10g01340 483 Gene3D alpha/beta hydrolase 42 301 IPR029058 -
Pte10g01340 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 141 151 IPR001563 GO:0004185|GO:0006508
Pte10g01340 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 445 458 IPR001563 GO:0004185|GO:0006508
Pte10g01340 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 177 202 IPR001563 GO:0004185|GO:0006508
Pte10g01340 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 140 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01340 Pte-Chr10 31132410 31136429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01340 364 478 Calmodulin-binding Proteins AT2G22960 32.759 5.85e-15 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01340 K16297 - qsa:O6P43_026122 769.229