Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01325 ATGTCTCAGAAATCGCTGGTCCCCCCTTTACTCCATTCAATCAAATCATTGCCACCTGATTATAAAGTTTTGGGTTTTCATAGTTCCGATCAATTAGAGAAGAGTAAAGGTTTGGCAACAGGAAGGAGAGATGTAACGGAATCAACTATTCCTGAGACTGGCTCTCTGACTGAGGAGATGGATATGGATGTTCGGAATACCATTGGTGACATTAATCCCATTAACGAGGACTCGCCATATGGTGGGAAAACAATAGCAACGGACAGATTAACGACAAGTGAAGAAGACTTGGATTCTGTTGCGTTGACCTCACCATCCATATCAGGATTTCAGACTGAACGTAGATGGAGTGATACTACATTTTATGCTGGAAAAAAGAAGCTTCAATCATGGTTTCAAAACTCTAATGGGAATTGGGAACTGGGGAAGATACTATCCTCATCGAGTAATGAATCAGTAATTTCACTGCCGAAAGGGATGGTTTTAAAAGTCAATACTGAAACTTTGTTACCGGCCAATCCTGAGATTCTCGACGGAGTCTATGATCTCATGCAACTTAGTTATTTAAATGAACCGTCAGTGTTATATAATCTACAATACAGATACAATCAAGACATGATTTACACTAAGGCAGGGCCTGTTTTAGTTGCCATTAATCCCTTCAAAAAAGTTCACCTTTATGGTAATGATTACATTGAAGCATACAAGCACAAATCAATGGAAAGCCCACACGTGTATGCCATCACGGACACGGCCATGCGGGAAATGAGGCGCGGTAACCTTCCCATTTTCAGAATGATTAATGGTGAAAGTGGAGCAGGAAAAACTGAGACAGCAAAGATAGCAATGCAATATTTAGCTTCCCTTGGTGGTGGAACTGGAATTGAATTTGAGATATTAAAAACAAATCCAATACTAGAAGCCTTTGGCAACGCAAAAACATTAAGAAATGACAATTCAAGTCGTTTTGGAAAGCTCATTGAGATCCATTTTAGTGAAAGTGGAAAAATATCAGGTGCTAATATTCAAACATGTAAACTGCAATCATCTCTTTTACAGTCTAGAGTTGTCCAGTGCAATGAGGGAGAAAGGTCTTATCATATATTTTATCAGCTCTGTGCCGGGGCAACACCTTCTCTTAGAGAGAAGCTAATCCTAAAAGGCGTAGATGAGTACAACTATTTGAAGCAGAGTAGTTGTCACTCAATTGCTGGAGTTGATGATGCACAACAATTCCGTACAGTCATGGAAGCCTTGGATGTTGTTCATATCAGCAAGCAAGACCAAGAGAGCGTATTTACAATGCTTTCTGCAATATTATGGATAGGCGACATTTCATTCAACATAATTGATAATGAAAATCATGTTGAAGCTGTAGCAGATGATGCTCTCCACAACGTTACCAAACTGATGGGGTGCAATCTTGAGGAACTGAAGCTAGCTCTTTCAACACGTAAAATGAAAGTTGGTAAAGATAATATTGTCCAAAAGCTAACGCTATCTCAGGCAATTGATGCGAGAGATGCTTTGGCAAAGTCAATTTATGCTTGTCTATTTGAGTGGCTGGTTGAGCAGATAAACAAGTCACTTGCAGTTGGCAAAAGGCGTACCGGCAGATCAATCAGTATACTGGATATCTATGGCTTTGAATCATTTGATAGGAACAGTTTTGAGCAGTTTTGCATAAATTATGCGAACGAGAGATTGCAGCAGCACTTTAATCGCCATTTGTTCAAACTAGAGCAGGAGGAATATGTACAAGATGGTATCGATTGGGCAAAAGTTGACTTCGAAGATAACCAAGATTGTCTTAGTCTATTTGAAAAGAAACCACTGGGATTACTGTCCCTACTGGATGAGGAATCCACGTTCCCAAATGGTACAGATATGACATTCGCCCACAAGCTTAAGCAGCATTTGAGTTCCAACTCTTGCTTCAGAGGAGAACGAGGCAAAGCATTTTCTGTTAACCATTATGCTGGGGAGGTCACATATGACACCACTGGATTTCTGGAGAAGAATAGGGACCTACTACACTTGGATTCCATTCAACTGTTATCTTCTTGCTCCTGCCGTCTTCCTCAGATTTTTGCATCCCATATGTTGAATCAATCGGATAAACCTGTGGTTGGTCCTCTGCATAAATTGGGTGGACCAGACTCTCAAAAATTAAGTGTGGCTACCAAATTCAAGGGCCAATTGTTCAAATTGATGCAACGTTTGGAGAGCACCACACCTCATTTCATACGTTGTATCAAGCCCAACAACCTTCAATCTCCAGGATTGTATGAGCAGCACCTTGTGCTGCAGCAGCTACGTTGTTGTGGTGTACTGGAGGTGGTTAGAATATCAAGATCTGGGTTTCCTACCAGAATGACTCATCAAAAATTTTCAAGAAGATATGGTTTTCTTCTTCTTGAAGATGTAGCATCCCAGGATCCACTTAGTGTGTCAGTTGCGATTCTCCACCAGTTCAATATTTTGCCAGACATGTATCAAGTTGGTTACACAAAATTGTTTTTCCGAACAGGGCAGATTGGGGTTCTTGAGGAGACCAGAAACCACACCCTACATGGGATCTTACGTGTTCAAAGTTGCTTCAGGGGACACTTGGCTCGTCAATATCTGAAGGAACTTAAGATTGGAATTTTAACTCTTCAGTCATGTATTTTTCCCATCTATCGCTTCTCCGGTTTCTTTTTCTTTTAA 2709 0.4057 MSQKSLVPPLLHSIKSLPPDYKVLGFHSSDQLEKSKGLATGRRDVTESTIPETGSLTEEMDMDVRNTIGDINPINEDSPYGGKTIATDRLTTSEEDLDSVALTSPSISGFQTERRWSDTTFYAGKKKLQSWFQNSNGNWELGKILSSSSNESVISLPKGMVLKVNTETLLPANPEILDGVYDLMQLSYLNEPSVLYNLQYRYNQDMIYTKAGPVLVAINPFKKVHLYGNDYIEAYKHKSMESPHVYAITDTAMREMRRGNLPIFRMINGESGAGKTETAKIAMQYLASLGGGTGIEFEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSESGKISGANIQTCKLQSSLLQSRVVQCNEGERSYHIFYQLCAGATPSLREKLILKGVDEYNYLKQSSCHSIAGVDDAQQFRTVMEALDVVHISKQDQESVFTMLSAILWIGDISFNIIDNENHVEAVADDALHNVTKLMGCNLEELKLALSTRKMKVGKDNIVQKLTLSQAIDARDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYVQDGIDWAKVDFEDNQDCLSLFEKKPLGLLSLLDEESTFPNGTDMTFAHKLKQHLSSNSCFRGERGKAFSVNHYAGEVTYDTTGFLEKNRDLLHLDSIQLLSSCSCRLPQIFASHMLNQSDKPVVGPLHKLGGPDSQKLSVATKFKGQLFKLMQRLESTTPHFIRCIKPNNLQSPGLYEQHLVLQQLRCCGVLEVVRISRSGFPTRMTHQKFSRRYGFLLLEDVASQDPLSVSVAILHQFNILPDMYQVGYTKLFFRTGQIGVLEETRNHTLHGILRVQSCFRGHLARQYLKELKIGILTLQSCIFPIYRFSGFFFF* 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01325 902 Gene3D - 788 895 - -
Pte10g01325 902 PANTHER MYOSIN 171 887 - -
Pte10g01325 902 ProSiteProfiles IQ motif profile. 858 885 IPR000048 GO:0005515
Pte10g01325 902 Gene3D - 364 420 - -
Pte10g01325 902 SMART MYSc_2a 172 855 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte10g01325 902 FunFam Unconventional myosin-XIX 552 744 - -
Pte10g01325 902 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 889 IPR027417 -
Pte10g01325 902 Pfam Myosin head (motor domain) 182 842 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte10g01325 902 Gene3D Myosin VI head, motor domain, U50 subdomain 421 529 - -
Pte10g01325 902 CDD MYSc_Myo8 192 842 IPR036022 -
Pte10g01325 902 FunFam Myosin heavy chain 364 420 - -
Pte10g01325 902 Gene3D - 552 744 - -
Pte10g01325 902 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 125 174 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pte10g01325 902 PRINTS Myosin heavy chain signature 304 331 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte10g01325 902 PRINTS Myosin heavy chain signature 208 227 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte10g01325 902 PRINTS Myosin heavy chain signature 262 287 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte10g01325 902 PRINTS Myosin heavy chain signature 593 621 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte10g01325 902 PRINTS Myosin heavy chain signature 540 568 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte10g01325 902 ProSiteProfiles Myosin motor domain profile. 178 854 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte10g01325 902 Gene3D Kinesin motor domain 177 787 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01325 Pte-Chr10 31037667 31049364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01325 7 890 Myosins gene family AT1G50360 73.529 0.0 1332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01325 - - qsa:O6P43_032275 1402.11