Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01315 ATGATTGTGGAAGAAGGGGCTAGTGGTTCTGAGTGGAGCAGAGAGCAAGACAAAGCATTTGAAAATGCTCTGGCAACTTATCCAGAGGATTGTTCAGATCGATGGGAGAAAATAGCTGCTGAAGTTGAGGGCAAAAGTACGGAGGAGATTAAGTATCACTATGAGCTTTTAGTTGATGATGTAAACAGGATTGAATCTGGTTGTGTACCATTGCCATCATATAATTCTTTCGAGGGTTCAACAAGCAATGCTGGCGATGAAGGAAATAGTAAGAGGGGAAATCATGGAGGGCACTCCACTGGTGAGTCAAATCATGGAAGCAAGGCTTCCAGGTCAGATCAGGAACGGCGAAAGGGAATTGCTTGGACAGAGGATGAGCACAGGTTGTTTCTTCTGGGTTTAGAGAAATATGGAAAAGGCGACTGGAGAAGCATATCTAGGAACTTTGTGGTGACAAGAACCCCCACACAAGTTGCGAGTCATGCCCAGAAATACTTCATCCGTTTGAATTCAATGAACAAAGACAGGAGGAGATCCAGTATTCATGATATCACAAGCGTGAACAACGGAGACATTTTGGCTCCTCAAGGACCGATCACTGGCCAAACAAACGGATCTTCAGGAGTTTCTCCTGGAAAATCAACCAAACAAAATCCTCAAAGTCCAGCAGGCCCTCCAGCTTCAGGTGTGGGAATATACAGCACTGCTCCAACTATAGGCCAACCAATTGGAGGACCTCTTGTATCTGCTGTTGGCACACCAGTAAATCTTGCTGCTCCACCCCACATGGCATATGGGATAAGAACACCCTTACCTGGAGGTGTTGTTCCTGGTGCTCCAATGAACATGGGTCCAGTGACATACCCTATGCCTCACACATCTGCCCACAGGTGA 894 0.4631 MIVEEGASGSEWSREQDKAFENALATYPEDCSDRWEKIAAEVEGKSTEEIKYHYELLVDDVNRIESGCVPLPSYNSFEGSTSNAGDEGNSKRGNHGGHSTGESNHGSKASRSDQERRKGIAWTEDEHRLFLLGLEKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVNNGDILAPQGPITGQTNGSSGVSPGKSTKQNPQSPAGPPASGVGIYSTAPTIGQPIGGPLVSAVGTPVNLAAPPHMAYGIRTPLPGGVVPGAPMNMGPVTYPMPHTSAHR* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01315 297 Gene3D - 120 172 - -
Pte10g01315 297 Pfam Myb-like DNA-binding domain 121 166 IPR001005 -
Pte10g01315 297 Pfam Myb-like DNA-binding domain 11 54 IPR001005 -
Pte10g01315 297 CDD SANT 121 166 IPR001005 -
Pte10g01315 297 ProSiteProfiles Myb-like domain profile. 114 166 IPR001005 -
Pte10g01315 297 SUPERFAMILY Homeodomain-like 10 66 IPR009057 -
Pte10g01315 297 CDD SANT 11 58 IPR001005 -
Pte10g01315 297 SMART sant 8 60 IPR001005 -
Pte10g01315 297 SMART sant 118 168 IPR001005 -
Pte10g01315 297 ProSiteProfiles SANT domain profile. 7 62 IPR017884 -
Pte10g01315 297 MobiDBLite consensus disorder prediction 79 118 - -
Pte10g01315 297 MobiDBLite consensus disorder prediction 188 233 - -
Pte10g01315 297 MobiDBLite consensus disorder prediction 188 224 - -
Pte10g01315 297 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 113 170 IPR017930 -
Pte10g01315 297 Gene3D - 4 71 - -
Pte10g01315 297 ProSiteProfiles SANT domain profile. 122 170 IPR017884 -
Pte10g01315 297 FunFam transcription factor MYB1R1 120 171 - -
Pte10g01315 297 ProSiteProfiles Myb-like domain profile. 4 58 IPR001005 -
Pte10g01315 297 SUPERFAMILY Homeodomain-like 116 171 IPR009057 -
Pte10g01315 297 PANTHER TRANSCRIPTION FACTOR KUA1 8 293 - -
Pte10g01315 297 FunFam Transcription factor SRM1 4 71 - -
Pte10g01315 297 NCBIfam myb-like DNA-binding domain, SHAQKYF class 118 168 IPR006447 GO:0003677
Pte10g01315 297 MobiDBLite consensus disorder prediction 79 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01315 Pte-Chr10 30965716 30971925 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte10g01315 Myb_DNA-binding 2.2e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01315 - - pvy:116143636 491.886