Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01314 ATGATTGTGGAAGAAGGGGCTAGTGGTTCTGAGTGGAGCAGAGAGCAAGACAAAGCATTTGAAAATGCTCTGGCAACTTATCCAGAGGATTGTTCAGATCGATGGGAGAAAATAGCTGCTGAAGTTGAGGGCAAAAGTACGGAGGAGATTAAGTATCACTATGAGCTTTTAGTTGATGATGTAAACAGGATTGAATCTGGTTGTGTACCATTGCCATCATATAATTCTTTCGAGGGTTCAACAAGCAATGCTGGCGATGAAGGAAATAGTAAGAGGGGAAATCATGGAGGGCACTCCACTGGTGAGTCAAATCATGGAAGCAAGGCTTCCAGGTCAGATCAGGAACGGCGAAAGGGAATTGCTTGGACAGAGGATGAGCACAGGTTGTTTCTTCTGGGTTTAGAGAAATATGGAAAAGGCGACTGGAGAAGCATATCTAGGAACTTTGTGGTGACAAGAACCCCCCACACAAGTTGCGAGTCATGCCCAGAAATACTTCATCCGTTTGAATTCAATGAACAAAGACAGGAGGAGATCCAGTATTCATGA 549 0.4426 MIVEEGASGSEWSREQDKAFENALATYPEDCSDRWEKIAAEVEGKSTEEIKYHYELLVDDVNRIESGCVPLPSYNSFEGSTSNAGDEGNSKRGNHGGHSTGESNHGSKASRSDQERRKGIAWTEDEHRLFLLGLEKYGKGDWRSISRNFVVTRTPHTSCESCPEILHPFEFNEQRQEEIQYS* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01314 182 NCBIfam myb-like DNA-binding domain, SHAQKYF class 118 156 IPR006447 GO:0003677
Pte10g01314 182 MobiDBLite consensus disorder prediction 75 107 - -
Pte10g01314 182 CDD SANT 11 58 IPR001005 -
Pte10g01314 182 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 8 155 IPR043363 -
Pte10g01314 182 Gene3D - 4 71 - -
Pte10g01314 182 ProSiteProfiles SANT domain profile. 7 62 IPR017884 -
Pte10g01314 182 FunFam Transcription factor SRM1 4 71 - -
Pte10g01314 182 ProSiteProfiles Myb-like domain profile. 114 155 IPR001005 -
Pte10g01314 182 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 113 155 IPR017930 -
Pte10g01314 182 SUPERFAMILY Homeodomain-like 116 156 IPR009057 -
Pte10g01314 182 SMART sant 8 60 IPR001005 -
Pte10g01314 182 SMART sant 118 168 IPR001005 -
Pte10g01314 182 CDD SANT 121 155 IPR001005 -
Pte10g01314 182 ProSiteProfiles SANT domain profile. 122 156 IPR017884 -
Pte10g01314 182 Gene3D - 120 157 - -
Pte10g01314 182 ProSiteProfiles Myb-like domain profile. 4 58 IPR001005 -
Pte10g01314 182 SUPERFAMILY Homeodomain-like 10 66 IPR009057 -
Pte10g01314 182 MobiDBLite consensus disorder prediction 75 118 - -
Pte10g01314 182 Pfam Myb-like DNA-binding domain 121 155 IPR001005 -
Pte10g01314 182 Pfam Myb-like DNA-binding domain 11 54 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01314 Pte-Chr10 30934038 30940126 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte10g01314 Myb_DNA-binding 6.3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01314 - - qsa:O6P43_026168 265.774