Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01305 ATGGTTAATCAGACTCATTTAGTTATTATTTGTGTAGCTGCTGGTTTGACCCTTGGACTTTCGATAGCTTCCCTCACATATTTTTGCATAAGGTGGTATAAAAAGCGTGCTAATCTTCGAAGATGTGCGAACGAGCTTAGTTTGCCAACTTTACCTTTTCGGTATAATGGCTTTGGAGCTAGTGCTGATTCCAGTGCGTCTCTCGCGGGTTCTGTAGAACCCCAAGTTTCCCAAAACCTCAAGAAGAGTTCTCATTTCAGTTGGTGGAATAATCAGAACAAAGATCGTTTTTCTTCTGCTTCAGGAATACCCAAATACTCATACAAGGAAATCCAGAAGGCAACCCAAACTTTCACCACCGTCTTGGGACATGGATCATTCGGTCCTGTTTACAAAGCCACAATGGTAACAGGAGAAGTACTAGCTGTAAAGGTGCTTGCTTCTGATTCTAGACAAGGGGAGAAAGAATTTCAAACAGAGGTTTCACTTCTAGGGAGACTTCATCACCGAAATCTTGTGAATTTGGTGGGTTATTGTGTAGATAAAGGACATCGTATCTTGATCTATGAGTTCATGAGCAATGGAAGCTTAGAGAAGATCCTTTACTGTGAAGAAAACAATGCCTTAAGTTGGGATCAGAGGCTTCAAATTGCTCTGGATATAGCCCATGGAATTGAATATCTACATGAAGGAGCTGTCCCCACAGTGGTACATCGGGATCTGAAATCTGCAAATATATTGTTAGATGGCTTACTGAGAGCAAAGGTTGCTGACTTTGGGCTATCAAAGGAACAACGGGTTTTGAACAGCCAAAAATCTACACTAAAAGGCACATATGGGTACATGGATCCTGCGTACGTATCCACAAACAAATTTACGACAAAGAGTGACATATACAGTTTTGGTGTTATTATTTATGAGCTCATCACTGCTATTCACCCCCAGAAAAACTTGATGGAGTTTGTTAATCTTGCGGCAATGAATTATGATGGTGTGGATGAGATCCTCGATAAACAGCTTGTTGGAAAATGCGACATTGAAGAAGTAAGGATGTTGGCCAATGTTGCACAAAGATGCGTGAACAAAATGCCTAAAAAGAGACCCAATGTAGCTGAAATTTCACAGGCTATCTTGAAGATAAAACGGAGGTGCCATGTTGCACAAGATACAGTGTCATTTGCAAGCAGGATGGAAGATACAAATGCTGAGCCAGACCCCTGCACGATGAAGGAGCTTGTATGA 1242 0.4138 MVNQTHLVIICVAAGLTLGLSIASLTYFCIRWYKKRANLRRCANELSLPTLPFRYNGFGASADSSASLAGSVEPQVSQNLKKSSHFSWWNNQNKDRFSSASGIPKYSYKEIQKATQTFTTVLGHGSFGPVYKATMVTGEVLAVKVLASDSRQGEKEFQTEVSLLGRLHHRNLVNLVGYCVDKGHRILIYEFMSNGSLEKILYCEENNALSWDQRLQIALDIAHGIEYLHEGAVPTVVHRDLKSANILLDGLLRAKVADFGLSKEQRVLNSQKSTLKGTYGYMDPAYVSTNKFTTKSDIYSFGVIIYELITAIHPQKNLMEFVNLAAMNYDGVDEILDKQLVGKCDIEEVRMLANVAQRCVNKMPKKRPNVAEISQAILKIKRRCHVAQDTVSFASRMEDTNAEPDPCTMKELV* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01305 413 FunFam Calcium/calmodulin-regulated receptor-like kinase 1 90 191 - -
Pte10g01305 413 SMART serkin_6 116 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g01305 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Pte10g01305 413 Pfam Protein tyrosine and serine/threonine kinase 118 376 IPR001245 GO:0004672|GO:0006468
Pte10g01305 413 FunFam PTI1-like tyrosine-protein kinase 3 192 391 - -
Pte10g01305 413 ProSiteProfiles Protein kinase domain profile. 116 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g01305 413 Gene3D Phosphorylase Kinase; domain 1 78 191 - -
Pte10g01305 413 SUPERFAMILY Protein kinase-like (PK-like) 85 375 IPR011009 -
Pte10g01305 413 Gene3D Transferase(Phosphotransferase) domain 1 192 401 - -
Pte10g01305 413 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 7 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01305 Pte-Chr10 30849726 30853200 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01305 102 373 Receptor kinase-like Gene Family AT3G19300 42.294 1.06e-69 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Pte10g01305 PK_Tyr_Ser-Thr 1.8e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01305 - - gmx:100819995 561.222