Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01294 ATGGATTTGGACCAGTGGATCGAGAAGGTCAAAGAAGGACAACATCTCATGGAAGACGAGCTTCAGTTTCTCTGCGAATATGTAAAAGAGATCCTAATTGAGGAATCCAATGTGCAGCCTGTCAATAGTCCAGTAACTGTTTGTGGTGACATTCATGGTCAGTTTCATGATCTAATGAAACTTTTCCAGACAGGGGGTCACGTGCCTGACACAAATTATATTTTTATGGGAGATTTTGTAGATCGAGGATACAATAGTCTCGAAGTTTTCACCATCCTTTTACTACTTAAAGCGAGATATCCTGCTCATATTACTCTCTTGCGTGGAAACCATGAAAGCAGGCAGCTTACCCAGGTCTACGGATTTTATGATGAATGCCAAAGGAAGTATGGAAATGCAAATGCATGGCGATATTGTACAGATGTGTTTGACTATCTGACTCTTTCTGCTATAATTGATGGAACTGTGCTTTGTGTGCATGGCGGTCTATCTCCTGATGTTCGAACTATAGATCAGATAAGGCTCGTAGAGAGAAACTGTGAAATTCCTCACGAGGGGCCCTTCTGTGATCTGATGTGGAGCGATCCTGAAGATATCGAAACTTGGGCAGTCAGTCCTCGTGGAGCAGGATGGCTTTTTGGATCCAGGGTCACTTCTGAGTTTAATCATATAAATAATCTTGATTTGGTTTGTCGAGCACACCAACTTGTACAAGAAGGCCTGAAGTACATGTTTCAAGATAAAGGCCTAGTAACAGTGTGGTCTGCTCCAAATTACTGCTACCGTTGTGGAAACGTGGCTTCTATCTTGAGTTTTAATGAGAGTATGGAAAGAGAAGTTAAGTTCTTCACTGAAACAGAAGAAAACAACCAAATGAGAGGGCCAAGAACCGGAGTTCCGTACTTCTTGTAA 912 0.42 MDLDQWIEKVKEGQHLMEDELQFLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPDTNYIFMGDFVDRGYNSLEVFTILLLLKARYPAHITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDVRTIDQIRLVERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNESMEREVKFFTETEENNQMRGPRTGVPYFL* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01294 303 CDD MPP_PP2A_PP4_PP6 2 285 - -
Pte10g01294 303 PRINTS Serine/threonine phosphatase family signature 249 265 IPR006186 GO:0016787
Pte10g01294 303 PRINTS Serine/threonine phosphatase family signature 141 167 IPR006186 GO:0016787
Pte10g01294 303 PRINTS Serine/threonine phosphatase family signature 44 71 IPR006186 GO:0016787
Pte10g01294 303 PRINTS Serine/threonine phosphatase family signature 73 100 IPR006186 GO:0016787
Pte10g01294 303 PRINTS Serine/threonine phosphatase family signature 226 246 IPR006186 GO:0016787
Pte10g01294 303 PRINTS Serine/threonine phosphatase family signature 170 197 IPR006186 GO:0016787
Pte10g01294 303 PRINTS Serine/threonine phosphatase family signature 106 130 IPR006186 GO:0016787
Pte10g01294 303 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 2 303 IPR047129 GO:0004722
Pte10g01294 303 FunFam Serine/threonine-protein phosphatase 1 303 - -
Pte10g01294 303 SUPERFAMILY Metallo-dependent phosphatases 2 286 IPR029052 -
Pte10g01294 303 ProSitePatterns Serine/threonine specific protein phosphatases signature. 107 112 IPR006186 GO:0016787
Pte10g01294 303 Gene3D - 1 303 IPR029052 -
Pte10g01294 303 Pfam Calcineurin-like phosphoesterase 44 235 IPR004843 GO:0016787
Pte10g01294 303 SMART pp2a_7 16 287 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01294 Pte-Chr10 30722103 30727585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01294 43 221 Calmodulin-binding Proteins AT5G63870 37.500 1.36e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01294 K15498 - mnt:21405849 629.787