Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01281 ATGGGAAATTGCTGGTGTAGTTGGGAGCCCTCAGTTTACAGAGTCTCAGCCAATGCAAAATCAGACCAAAGCCCTATAGCTAAACAGAGGAAGGAAGATTGGAAATTACCATCCACCCCCAAAGAAGTCGAGGATTTACGCAGGGATTTTGCTGCAAATCCATTGATTGTCTTCACCTACGAAGAATTAAAGATAATTACTGGGAACTTTAGGCAAGACCGTGTTTTGGGTGGAGGAGGATTTGGAAGCGTTTATAAAGGTTTTATATCTGATGACGTGAGAGAGGGATTACCTACCCTTACAGTAGCTGTTAAGGTTCATGATGGTGACAATAGTCATCAAGGCCACAGGGAATGGCTGGCAGAAGTTATATTTTTGGGGCAGCTTTCTCATCCAAATTTGGTCAAATTGATCGGATACTGCTGTGAAGATGAGCACCGGGTGCTAATATATGAGTACATGGCCCGTGGTAGTGTCGAAAACAATCTATTTTCCAATTGGGCACTCCCTTTGCTTAAAGAGAAGAAGAAACTGCTAAACATAGTTGATCCAAGGTTACAAGGGGATTACCCCATCAAAGGGGTTCACAAGGCAGCCATGCTAGCCTACCATTGCTTGAATCGCAATCCGAAAGCGAGGCCTTTAATGCGGGACATAGTAGACTCCTTGGAGCCTCTGCAGGTTGCTGACGAAGTTTCTGTAGGCAAAACTATAACTGTCATCACAGAAGCTGAACTAAAAGGAAAAGATGCAGTGCCTTAG 762 0.4409 MGNCWCSWEPSVYRVSANAKSDQSPIAKQRKEDWKLPSTPKEVEDLRRDFAANPLIVFTYEELKIITGNFRQDRVLGGGGFGSVYKGFISDDVREGLPTLTVAVKVHDGDNSHQGHREWLAEVIFLGQLSHPNLVKLIGYCCEDEHRVLIYEYMARGSVENNLFSNWALPLLKEKKKLLNIVDPRLQGDYPIKGVHKAAMLAYHCLNRNPKARPLMRDIVDSLEPLQVADEVSVGKTITVITEAELKGKDAVP* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01281 253 FunFam Serine/threonine-protein kinase BIK1 37 153 - -
Pte10g01281 253 Gene3D Transferase(Phosphotransferase) domain 1 151 243 - -
Pte10g01281 253 ProSitePatterns Protein kinases ATP-binding region signature. 76 105 IPR017441 GO:0005524
Pte10g01281 253 SUPERFAMILY Protein kinase-like (PK-like) 53 172 IPR011009 -
Pte10g01281 253 Gene3D Phosphorylase Kinase; domain 1 33 150 - -
Pte10g01281 253 Pfam Protein tyrosine and serine/threonine kinase 72 166 IPR001245 GO:0004672|GO:0006468
Pte10g01281 253 PANTHER OS01G0588500 PROTEIN-RELATED 166 227 - -
Pte10g01281 253 ProSiteProfiles Protein kinase domain profile. 70 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01281 Pte-Chr10 30630007 30633975 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01281 57 163 Receptor kinase-like Gene Family AT5G56890 49.533 1.18e-23 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pte10g01281 PK_Tyr_Ser-Thr 6.9e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01281 - - qsu:112038666 295.434