Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01274 ATGTCTGAAGGAACAAGTCTTGTGATGGAATCCTCTGAAAATGGCACGGATTTATCTCAAGAAGATATCGGCACAATTGAGGAAATGCCTGAGGATACTATTCTTTCACAACAAACTTCTGTGAATCTTGTTCCATTTATAGGTCAAAGATTTGTGTCCCAAGAGGCTGCCTATGAATTTTATTGCAGTTTTGCAAAACAATGTGGCTTCTCTATTCGACGCCACCGCACCCGGGGGAAAGATGGGGTTGGCCGTGGAGTTACAAGGAGAGATTTTACCTGCCACCGTGGTGGATTTCCACAAATAAAGCCCTCTGAAGATGGAAAGATGCAAAGAAATAGAAAATCGTCACGCTGTGGTTGCCAAGCATATATGCGTATAGTGAAAAGGGCGGTCTTTGAAGTTCCGGAATGGCGTGTTACAGGCTTTAGTAATGTCCACAACCATGAATTATTGAAATCTAATGAAGTTCGCTTCCTTCCCTCCTACAGTACAATATCTTCAGACGACAAAAGTAGAATATGCATGTTTGCAAAGGCTGGAATGTCTGTGAGGCAGATGCTAAGATTGATGGAACTAGAGAAAGGCATTAAACTAGGCTGTTTACCATTCAATGAAATAGATGTGAGGAACTTGTTACAATCTTTCAGAAATGTTGATAAAGATCATGATGCCATTGACCTTATTGCAATGTGCAAAAAAATGAAAGATGAGAATTCTGACTTCAAGTATGATTTTAAGATAGACAGTAATAATAGGCTTGAGCATATAGCATGGTCATATGCTTCCTCTTTGCAATTATATGAGACACATGGGGATGCTGTGATATTTGATACAACCCACCGGTTGGATGCTTATGACATGCTACTAGGCATCTGGCTTGGAGTTGACAGTCATGGGATGACTTGTTTTTTTGGCTGTTCACTTTTAGTGGATGAAAATTTGCAGTCTTTCTCATGGGCTCTTAAGACATTTTTAGGCTTCATGAGAGGTAAGGCTCCGCAGACAATATTAACAGACCATAACATGTGGCTGAAAGAGGCTATTGCTGTTGTGATGCCAGAAACAAAGCATGCCTTTTGCATATGGCACATTATTGCAAAGTTCTTTGATTGGTTCTCTGTGCTTCTTGGATCACATTATGATGAGTGGAAAGATGAGTTTCATCGGCTCTACAACTTAGAGTTGGCAGAAGAGTTTGAAGAAGGATGGAAGAAAATGGTGGATATGTATGGACTCCATGCAAATAAGCATATTGCAAGCTTGTATTCTTTAAGGGAATTTTGGGCTTTGCCATTTTTGAGGCGCTACTTTTTTGCCGGTTTGATGGGTACATCTCAGTCGGAGTCCATAAATGCTTTTATCCAACGGTTTTTGAGTGCACAGACTTATCTTGATAGTTTTGTAGAGAAGGTGGCTTATATAGTTGATTATAATGACCGTGCTGGAGCAAAGCACAAGTTGCAGAAAAAACTGCAGAAAGTTTGTCTCAGGACAGGTTCTCCAATTGAATCCCATGCTGCCACAGTACTTAGTCCTTATTCATTCTCTAAACTCCAAGAGGAGCTTGTTTTGGCTCCGCAATATGCATCAGTACCTATTGATGATAGTTGTTTTGAGGTCAGACATCATACACAGATGGATGGAGGGTGCAAAGTCATCTGGATCCCTTGTCAAGAGCACATGAGCTGCAGCTGCTGTTATTTTGAGTTTTCTGGCATATTGTGTCGGCATATTCTTCGAGTTATGTCAACTAATAACTGCTTTCATATTCCAGATCAATATTTACCAATTCGTTGGCGAGTTACTGGTTCATCATCAGGTGCCCCCTTCCGGACTATAACTATCACTAGAGAGCAACCTGAGAAGGTGCAGTTGTTGGAATCCTTGGTTCCCAAACTCATTGCAGAATCTGTTGAAACTGAGGAACGGCTTGATGTGGCTTGTGAGCAAATGGCAATGGTGTTAGCCCACATAAAAAACCTTCCGAGGTCAACACATAGTATGCATGACATTTCTTACAATTATCCATCTGATTCATTGATACTACAAAATGCAGAAGATTCTGATGGAATGATTCATGGTTTTACCATGGAGAACTCCCATGATTCCCTTAATATAGGAAAGCTAAAAGAGAAAAGAGCCAGAGATGGAGTTGATGTCACTAGAAAAAGGAGGCACTTTTCAGGGCCATATTGTGGGCAATATGGGCAAGATGAATCTGATTGTTCTTTATTGGGTAGCAATATGAACGGCAATGAACTGGGGTACATATAG 2277 0.4071 MSEGTSLVMESSENGTDLSQEDIGTIEEMPEDTILSQQTSVNLVPFIGQRFVSQEAAYEFYCSFAKQCGFSIRRHRTRGKDGVGRGVTRRDFTCHRGGFPQIKPSEDGKMQRNRKSSRCGCQAYMRIVKRAVFEVPEWRVTGFSNVHNHELLKSNEVRFLPSYSTISSDDKSRICMFAKAGMSVRQMLRLMELEKGIKLGCLPFNEIDVRNLLQSFRNVDKDHDAIDLIAMCKKMKDENSDFKYDFKIDSNNRLEHIAWSYASSLQLYETHGDAVIFDTTHRLDAYDMLLGIWLGVDSHGMTCFFGCSLLVDENLQSFSWALKTFLGFMRGKAPQTILTDHNMWLKEAIAVVMPETKHAFCIWHIIAKFFDWFSVLLGSHYDEWKDEFHRLYNLELAEEFEEGWKKMVDMYGLHANKHIASLYSLREFWALPFLRRYFFAGLMGTSQSESINAFIQRFLSAQTYLDSFVEKVAYIVDYNDRAGAKHKLQKKLQKVCLRTGSPIESHAATVLSPYSFSKLQEELVLAPQYASVPIDDSCFEVRHHTQMDGGCKVIWIPCQEHMSCSCCYFEFSGILCRHILRVMSTNNCFHIPDQYLPIRWRVTGSSSGAPFRTITITREQPEKVQLLESLVPKLIAESVETEERLDVACEQMAMVLAHIKNLPRSTHSMHDISYNYPSDSLILQNAEDSDGMIHGFTMENSHDSLNIGKLKEKRARDGVDVTRKRRHFSGPYCGQYGQDESDCSLLGSNMNGNELGYI* 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01274 758 Pfam FAR1 DNA-binding domain 59 152 IPR004330 -
Pte10g01274 758 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 38 652 IPR031052 GO:0006355
Pte10g01274 758 ProSiteProfiles Zinc finger SWIM-type profile. 539 587 IPR007527 GO:0008270
Pte10g01274 758 MobiDBLite consensus disorder prediction 1 20 - -
Pte10g01274 758 Pfam SWIM zinc finger 563 584 IPR007527 GO:0008270
Pte10g01274 758 Pfam MULE transposase domain 275 367 IPR018289 -
Pte10g01274 758 SMART 26again6 562 589 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01274 Pte-Chr10 30538461 30542653 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pte10g01274 MULE 2.9e-20 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01274 - - qsa:O6P43_021818 1314.29