Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01267 ATGAAAGAAGAAGAGGATGATGCAACCCTTGCACACCTTCAGTCAGCGTGCTCTGATTTGAAAGATCTAATGCAAACTTCAGCTAACATGCAACAAAGCTTATCGGAAATGGATAAGAGATTTGATGTTTTCGGACAAAATATTTCAGTGGCATCAAAGAGAATAGCACCTCTACAATCCTCTGCCATGATCACAAAAGCCCTTGAGACCAGAATCAACCGGGCTGTCTCTCCTGCATTGGCACTTCTTGATAGCTTCAAGCTGTCAGATTCTCTGCATCACAAGTTGCTTGAGCTCTCCTCGAATATGTCAATCAACAGGGGAGCTGAAAAACGCCTCAGGAAGCTTCTTGAATATGTGGACTGCGTTGATCAACTCAATGAGATCATCCACTCCATTTGCCAAGAGGGACAGCCAGTGATCCAGAAGCTTCAAGAAGTGGTGGAGTTCATAAGCAGGACTAAAGCGACGGATCAGCATAGGGCAAATAGGTTAAGAGAGACACTGATGACTCTTAAGGCATTGTATGAAAGGGAGGTGGATGAGATGAGGTTCGATGGTCTGCTTGACAAGGCTTTGCTCAGCATGCAGGATGAGTATGAGGTTCTGTTGGACAAGATCAAGCATCAAAACACTACAATTGGTTATTCGGTGTCAGAATCAGAAACACTGGCTGATAGAAACGCTGAGGATGGAGTGGCCATGGCTTATGAATTGGGCTCGGAGTTGCAGATTGAGGTTTTGAGACGCATTTCAGAGACACTAGCAGCCAACGACTGTTTAGACATATGCATAGACATTTATGTCAAGGTGAGGTATACAAGGACAGCAAAAGCATTAATGAGGCTAAACCCTGATTACTTGAGAACATACAGTCCTGAAGAAATTGATGAAATGGAGTGGGAGAGCTTGGAGACAGCAATATCTCTTTGGATTCAACACTTTGCGCTTGCTGTCCAGAACGTTCTCGTGTCAGAAAAGAGACTATGCAGTAAAGTGTTGGGTAAAATCATGGATGGGGCAGTGTGGCCAGAATGCTTTGTCAAGATATCTGATAAGATCATGGCAGTCTTCTTCAGATTTGGAGAAGGAGTTTCAAGGACCAGCAAAGAGCCTCAAAAGTTGTTCAAGCTCCTGGACATGTTCGATTCCTTAGAAAAAATCAAACCGGAATTCTCTCAAGTTTTTGAAGATGAAGCTGGAGAAGATATCTGCATTCGTTTCCGGGAGCTCGAAAAGCTTTTGATCCATGCTTCCAGCAAGGTCTTCTGGGAATTCGGTCTGCAAATTGAAGAAAGCTCAGATACGATCCCACCACCTCAAGATGGCTCCGTCCCCAAGCTCGTAAGATATGCCATCAATTATCTCAAGTACCTTGTTTCAGATCATTACATTGAGGCCATGAACAAAGTGCTTGAGACCGAGAAAATATGGAAGAGTGGCATGTTATCCGAGCCTGAAATTGACGACTTTCCACTTAGGGACGCCATTGCAAACGTGATGGAAGCCCTTCAAAGAAACGTGCATTCCAAGAAATCCCGTTTTAGGGACAGAATTCTTGGCCATGTATTTACAATGAACACATGTTGGTATATCTATATGAGGACTAAGAACACAGAGCTGAGTAAGCTACTGGGTGAGACATACATGAAAAAGAAATACAAGGGCGTGGCTGAGGAAGCAGCTTACTTGTACCAGAAGCAAGCATGGGGACCTATTGTTAAAATGCTAGAGTTAAATGAACTAAAGAAACAGAGCACGGGAACCTTTGGAAGCATGGTTAGGTTAAAAATAGAAAGTTTTTTGCAAGGCTTTGAGGACATGGCACAGAGGCATAAGAGGCTATATAGATTACCAGAAATTGACTTGAGGGAACAAATTAGACAAGCAACTGTGCAGTTTGTTGTAACACCATATGCTGAGTTTCTGGAAATGCATTCTGCTTTTTTGAAGGGGAAATACCTCAGTCCAGATAAATTGCGTAGTTTAGTGGGTCAGATTTTCGAAGGGAGTGATGCCAATTTGAAGAGCAATAGTTCAATTGATGGAAGGCAAAACTCAATTTTTGGAGACAGTAGTAACCAAAGATAG 2091 0.429 MKEEEDDATLAHLQSACSDLKDLMQTSANMQQSLSEMDKRFDVFGQNISVASKRIAPLQSSAMITKALETRINRAVSPALALLDSFKLSDSLHHKLLELSSNMSINRGAEKRLRKLLEYVDCVDQLNEIIHSICQEGQPVIQKLQEVVEFISRTKATDQHRANRLRETLMTLKALYEREVDEMRFDGLLDKALLSMQDEYEVLLDKIKHQNTTIGYSVSESETLADRNAEDGVAMAYELGSELQIEVLRRISETLAANDCLDICIDIYVKVRYTRTAKALMRLNPDYLRTYSPEEIDEMEWESLETAISLWIQHFALAVQNVLVSEKRLCSKVLGKIMDGAVWPECFVKISDKIMAVFFRFGEGVSRTSKEPQKLFKLLDMFDSLEKIKPEFSQVFEDEAGEDICIRFRELEKLLIHASSKVFWEFGLQIEESSDTIPPPQDGSVPKLVRYAINYLKYLVSDHYIEAMNKVLETEKIWKSGMLSEPEIDDFPLRDAIANVMEALQRNVHSKKSRFRDRILGHVFTMNTCWYIYMRTKNTELSKLLGETYMKKKYKGVAEEAAYLYQKQAWGPIVKMLELNELKKQSTGTFGSMVRLKIESFLQGFEDMAQRHKRLYRLPEIDLREQIRQATVQFVVTPYAEFLEMHSAFLKGKYLSPDKLRSLVGQIFEGSDANLKSNSSIDGRQNSIFGDSSNQR* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01267 696 PANTHER EXOCYST COMPLEX PROTEIN EXO70 78 670 IPR004140 GO:0000145|GO:0006887
Pte10g01267 696 Pfam Exo70 exocyst complex subunit 311 661 IPR046364 GO:0000145|GO:0005546|GO:0006887
Pte10g01267 696 Coils Coil 162 182 - -
Pte10g01267 696 Gene3D Exocyst complex component Exo70 156 677 - -
Pte10g01267 696 Coils Coil 20 40 - -
Pte10g01267 696 SUPERFAMILY Cullin repeat-like 179 669 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01267 Pte-Chr10 30502238 30504504 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01267 7 651 EXO70 exocyst subunit family AT4G31540 27.988 4.91e-76 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01267 - - qsa:O6P43_019023 921.383