Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01249 ATGGAAGAAGCGAGGTTGGATGAAAAAGAATTGGCAGAAGCAGAAGCTAAGGTAAAGATTTGGAGATATGCTTTTGGTTTTGTGGAATTGGCTGTTATCAGGTGTGCCATTGAGCTTGGGATAGCTGATGCTATTCAAAACCATGGACGAGCCATGACACTCTCTGAGTTGTCATCCGAGCTAGACTGCACACCTTCCTATCTCCACCGCATAATGAGGTTTCTGATACACAGGAAGATCTTCAAAATGATACTCACTATTGATGAAGCTGACATGGCTTATGACCAGACAGCTCTCTCCCGCCGTTTGTTGAAAAATGGAGAACAAAGCATGGCGGGACTGCTCATGCTGGAGAGCAGCCAAGTGATGCTGGCGCCTTGGCTTGCTCTGAGTGGTCATGCTTTATCCAATGGACCCCCATCGTTTGAAAAGGCTAATGGCAAAGATGTATGGAGTTACGCAGCTGATCATGCAGATCACAGTCAACTCATCGATGAAGCCATGGCCTGCGACGCTAGGGTTTCGGTGCCTGCGATCATGAAAGGTTTCCCCAAGGCCTTTGAAGGGATTGACACTTTGGTTGATGTGGGTGGTGGCAATGGTACTTCCTTGAGCTTATTGGTTAAGGCATTTCCATATATTCGTGGCATCAACTTCGATCTTCCCCATGTTATCTCCGGGGCAAAAAAGTCTGACGGTGTTGAAAATGTAGGGGGCGACATGTTTGCTCGTGTCCCACAAGCTGATGCTGCATTTCTCAAGTGGGTACTGCATGACTGGTCAGATGAGGAATGCATAACTATCTTAAGGAATTGTAGGGAAGCTATACCTAAGGATAAAGGGAAGGTGATCATTGTTGAAGCTGTTCTTGAAGAAGAAAGAGAGGATGAGTTAGAGGATGTGAGGTTGATGCTGGACATGGTGATGATGGCTCATACCAACTCAGGGAAAGAGAGAAGTTTGAAAGAATGGGCATATGTTATTGAGAAAGCAGGGTTCAGGCGATTCACTGTGTCTCCCATACATGCTGTGCAGTCTGTCATAATTGCTTTTCCATGA 1059 0.4608 MEEARLDEKELAEAEAKVKIWRYAFGFVELAVIRCAIELGIADAIQNHGRAMTLSELSSELDCTPSYLHRIMRFLIHRKIFKMILTIDEADMAYDQTALSRRLLKNGEQSMAGLLMLESSQVMLAPWLALSGHALSNGPPSFEKANGKDVWSYAADHADHSQLIDEAMACDARVSVPAIMKGFPKAFEGIDTLVDVGGGNGTSLSLLVKAFPYIRGINFDLPHVISGAKKSDGVENVGGDMFARVPQADAAFLKWVLHDWSDEECITILRNCREAIPKDKGKVIIVEAVLEEEREDELEDVRLMLDMVMMAHTNSGKERSLKEWAYVIEKAGFRRFTVSPIHAVQSVIIAFP* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01249 352 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 108 349 IPR029063 -
Pte10g01249 352 FunFam O-methyltransferase family protein 105 351 - -
Pte10g01249 352 Pfam Dimerisation domain 32 75 IPR012967 GO:0046983
Pte10g01249 352 Pfam O-methyltransferase domain 137 334 IPR001077 GO:0008171
Pte10g01249 352 PIRSF O-mtase 1 352 IPR016461 GO:0008168
Pte10g01249 352 Gene3D - 3 103 IPR036388 -
Pte10g01249 352 PANTHER O-METHYLTRANSFERASE 30 333 IPR016461 GO:0008168
Pte10g01249 352 Gene3D Vaccinia Virus protein VP39 105 352 IPR029063 -
Pte10g01249 352 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 352 IPR016461 GO:0008168
Pte10g01249 352 SUPERFAMILY "Winged helix" DNA-binding domain 15 107 IPR036390 -
Pte10g01249 352 FunFam O-methyltransferase family protein 3 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01249 Pte-Chr10 30370810 30372104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01249 3 338 Monolignol Biosynthesis Gene Families AT5G54160 33.913 1.35e-66 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01249 K22588 - cave:132167164 445.277