Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte10g01241 | ATGAGGGGAAGGAGTTATACTCCATCACCGCCCAGAGGTTACGGTAGAAGAGGACGGAGTCCTAGCCCAAGAGGCCGATACGGTGGTGGTCGTGGCAGAGATCTCCCCACTAGTCTTCTGGTTCGCAACCTTCGCCATGATTGTAGACCAGAAGACCTACGCAGGCCGTTTGGCCAATTTGGTCCTCTGAAGGACATCTACTTACCGAGGGATTATTATACCGGGCAACCTCGTGGATTCGGTTTTGTTCAATTTGTAGAACCTGCTGATGCTGCTGAAGCGAAGTATCAGATGGATGGTCAGATACTTTTTGGACGGGAGTTGACTGTTGTATTTGCGGAGGAGAATAGGAAAAAGCCAACTGAGATGAGGGCAAGGGAGCGAAGAGGCCTGTCTGATGACAGAAGGAGATCTCCGCCTCGCTATTCTCGCTCACCTCGTCACTCCCGCTACTCTCGCTCACCACCTCATCGTAGGTCTCACTTAAGGAGCCATGATGATTATCCCTCAGCAGCCAAACGAGGGCAACATTCAAGATCTGTTTCTCCTCAAGAGAGAAGGTACATGCGGGAGAGGTCATACTCACCTCAAGCTCGAGAAAGGTCTTACTCTCGTTCTCCACCCTACAGTGGATCAAGAAGCCGCAGTCAAAGTCCAATTAAGGGCCCTCCCATAAGCAGAAGCCCCAGCCCCCGGCACGTTGATTACTCCAGGGACGCTGCCCGCAGTGGATCCGGAGGTCAGTGA | 747 | 0.5261 | MRGRSYTPSPPRGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDLRRPFGQFGPLKDIYLPRDYYTGQPRGFGFVQFVEPADAAEAKYQMDGQILFGRELTVVFAEENRKKPTEMRARERRGLSDDRRRSPPRYSRSPRHSRYSRSPPHRRSHLRSHDDYPSAAKRGQHSRSVSPQERRYMRERSYSPQARERSYSRSPPYSGSRSRSQSPIKGPPISRSPSPRHVDYSRDAARSGSGGQ* | 249 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte10g01241 | 248 | SUPERFAMILY | RNA-binding domain, RBD | 37 | 142 | IPR035979 | GO:0003676 | |
Pte10g01241 | 248 | SMART | rrm1_1 | 38 | 111 | IPR000504 | GO:0003723 | |
Pte10g01241 | 248 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
Pte10g01241 | 248 | Gene3D | - | 30 | 214 | IPR012677 | - | |
Pte10g01241 | 248 | MobiDBLite | consensus disorder prediction | 141 | 159 | - | - | |
Pte10g01241 | 248 | MobiDBLite | consensus disorder prediction | 199 | 223 | - | - | |
Pte10g01241 | 248 | MobiDBLite | consensus disorder prediction | 117 | 140 | - | - | |
Pte10g01241 | 248 | MobiDBLite | consensus disorder prediction | 117 | 248 | - | - | |
Pte10g01241 | 248 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 37 | 115 | IPR000504 | GO:0003723 | |
Pte10g01241 | 248 | PANTHER | SERINE/ARGININE RICH SPLICING FACTOR | 36 | 232 | - | - | |
Pte10g01241 | 248 | MobiDBLite | consensus disorder prediction | 160 | 198 | - | - | |
Pte10g01241 | 248 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 39 | 108 | IPR000504 | GO:0003723 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte10g01241 | Pte-Chr10 | 30312790 | 30315925 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte10g01241 | 37 | 145 | Eukaryotic Initiation Factors Gene Family | AT4G34110 | 29.730 | 5.62e-10 | 57.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte10g01241 | K12900 | - | vvi:100263951 | 259.996 |