Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte10g01232 | ATGGCATTTTGCAATAGAATTGGAAGCCTCTTGATGCGGGGTGCTGCTCAGAACAGTCGAGCACCGTCAGCTATCTTTAATTCCTTTCGCTGCATGTCTTCAAGTTCAACGAAGCTTTTTGTTGGTGGTCTTTCATGGGGAGTTGATGACAATTCTCTGAAAGATGCATTTTCTGGCTTTGGAGATGTTGTCGAGGCAAGAGTTATCGTCCACCGGGACACTGGAAGGTCTAAAGGATTTGGATTTGTCAACTTCTCCAGTGGGGAATCAGCAAGTGCTGCAGTAACTGCAATGGATGGCCAGGAACTAGATGGGCGCAACATCCGTGTGAGTCTTGCCGCAGACAAACCTCCTGCATCTCGGAGTTTTGGTGGTGGTTTCCGTGGGAATGGAGATTTTGGAAACCCAAGCTTTTAA | 417 | 0.4748 | MAFCNRIGSLLMRGAAQNSRAPSAIFNSFRCMSSSSTKLFVGGLSWGVDDNSLKDAFSGFGDVVEARVIVHRDTGRSKGFGFVNFSSGESASAAVTAMDGQELDGRNIRVSLAADKPPASRSFGGGFRGNGDFGNPSF* | 139 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte10g01232 | 138 | SUPERFAMILY | RNA-binding domain, RBD | 32 | 135 | IPR035979 | GO:0003676 | |
Pte10g01232 | 138 | CDD | RRM2_NsCP33_like | 38 | 113 | - | - | |
Pte10g01232 | 138 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 37 | 115 | IPR000504 | GO:0003723 | |
Pte10g01232 | 138 | Gene3D | - | 17 | 136 | IPR012677 | - | |
Pte10g01232 | 138 | SMART | rrm1_1 | 38 | 111 | IPR000504 | GO:0003723 | |
Pte10g01232 | 138 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 39 | 109 | IPR000504 | GO:0003723 | |
Pte10g01232 | 138 | PANTHER | GEO13361P1-RELATED | 30 | 126 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte10g01232 | Pte-Chr10 | 30215435 | 30218356 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte10g01232 | 39 | 116 | Eukaryotic Initiation Factors Gene Family | AT1G34140 | 43.590 | 2.39e-13 | 63.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte10g01232 | - | - | zju:107422279 | 171.785 |