Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01230 ATGCTCTCCCACGGAGTAACAATCCCAGGAAGCGACTCCCGCTTCTACATTCCACCAAATCCGACCCTTTACTCTGCAGTTTCCTCCAGAAGGTCGATTTTTTCGAATACCCAATTCGCAAAACCGCAACTTTCGTCAAAAATTTCTTTTGGGTCATTGAAAGCTAAAGCTGCCATTAACGAGGGGTTTGTGATTGAAGCCAATGAATTGAGCTTTTATGAGCTTCTGGGTATTTCGGAATCGGATTCCTTGTTGGAAATCAAACAAGCGTACAAGCAGCAAGCAAGAAAGTACCATCCAGACGTGTCGCCCCCGGATCGAGTTGAAGAGTATACGAGGAGGTTTATTATGGTGCACGAAGCTTATGAGACTCTGTCTGATCCTAGAAGGAGAGCCATGTATGATAAAGACATGGCCAGAGGTCTTCACCTTGCTTTCTCTGCTCGCAGACGGTACTATGATGATGATGAGATAATTGAAGAGAAAGGAGAGTGGAGAAATCGTTGGCAAGATCAGTTATCCGAGCTGAAGAGACGAAGTATGAACAAGGACACTGGAAATATGTCATGGGGAGCTCGAATGCGTTCTCAAAGAGCTGGCTTATCTGACGAAGCATAG 618 0.4531 MLSHGVTIPGSDSRFYIPPNPTLYSAVSSRRSIFSNTQFAKPQLSSKISFGSLKAKAAINEGFVIEANELSFYELLGISESDSLLEIKQAYKQQARKYHPDVSPPDRVEEYTRRFIMVHEAYETLSDPRRRAMYDKDMARGLHLAFSARRRYYDDDEIIEEKGEWRNRWQDQLSELKRRSMNKDTGNMSWGARMRSQRAGLSDEA* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01230 205 ProSitePatterns Nt-dnaJ domain signature. 115 134 IPR018253 -
Pte10g01230 205 MobiDBLite consensus disorder prediction 180 205 - -
Pte10g01230 205 CDD DnaJ 72 127 IPR001623 -
Pte10g01230 205 ProSiteProfiles dnaJ domain profile. 71 138 IPR001623 -
Pte10g01230 205 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 51 199 - -
Pte10g01230 205 SMART dnaj_3 70 130 IPR001623 -
Pte10g01230 205 Pfam DnaJ domain 72 135 IPR001623 -
Pte10g01230 205 FunFam Chaperone protein dnaJ 20, chloroplastic 57 167 - -
Pte10g01230 205 Gene3D DnaJ domain 61 159 IPR036869 -
Pte10g01230 205 PRINTS DnaJ domain signature 110 130 IPR001623 -
Pte10g01230 205 PRINTS DnaJ domain signature 130 149 IPR001623 -
Pte10g01230 205 PRINTS DnaJ domain signature 91 106 IPR001623 -
Pte10g01230 205 PRINTS DnaJ domain signature 73 91 IPR001623 -
Pte10g01230 205 SUPERFAMILY Chaperone J-domain 67 143 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01230 Pte-Chr10 30192246 30194572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01230 73 135 C2H2 Transcription Factor Family AT1G74250 43.939 2.13e-06 45.8