Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01191 ATGTTGATAACGGTCAGAGCAGCTACTGCTTCCGCTTTTGCTGCTTCGGCTTCCGTTGGTTTCAGTAGCTCTGCTCACCCTTACTTCAACTCCAGTGCCTCTTGCAGACCGAAAACCACAACCTGCCGTGCCAGTTTCTCTGTGCATACGAGGCCCAACTGCAGCAGCACCAAGTCATCCATACCTGTTTCAAGTCGTAATGCCTCAAGTTTTGACCCCTTGGATATCAATCGAGATGGTTTTACTCTCAATTCTGCATTGGACAGTCTTGTAAACCTACTTTCACAAATGTTTGAAAGCGCTTCTGGTACGAAGAAGGAAAAGCCTACTTCAAGTCGTGGTATTGCAGCTGCAATTGAGGATAGCTCGATTGATTTTGGGGACTTCTTCAAAGGGCCATTACCTGGAAAATTTCTCAAACTCCTGGGATATCTTGCCTTATCAAGGCTAGGTATATACATACCACTTGGTGGGGTAAATCGAGATGCTTTTGTCGGTAATTTGGATGAGAGCAGTTTTTTGAGTACTTTGGATTCATTTTCTGGAGGAGGAATTGGCAGGCTTGGAATATGTTCTCTTGGTATTGTTCCCTTTATCAATGCACAAATTGTATTCCAGCTACTTGCTCAAATCTACCCCACATTGCAAAACCTTCAGAAAAGAGAAGGTGAAGCAGGACGAAAGAAAGTCCTTCAGTATACTAGATATGCATCAGTTGGATTTGCGCTAGTACAGGCTATTGGACAAGCACTCTATCTTCGTCCTTATGTCAATGATTTCAGTACCCAATGGGTTCTCTCTTCTGTTGCGTTATTGACTATTGGTTCTGTGCTTACAACATATATTGGCGAACGAATCTCAGACCTCAAACTTGGGAATGGCACTTCTCTTTTGATATTCACAAATATTATCTCCTACTTGCCAGCTTCTTTTGGTAGAACTATAGCACAGGCATTTCAGGATGGAAACTACGTTGGACTTGCCACTATCGTCTTTTCCTTCATTCTCTTGGTGCTTGGTATTGTCTATGTTCAGGAAGCAGAGAGAAAAATCCCAATCAACTATGCATCAAGATACATGAGTAGAAGTGGAGGGCTTCAAAAATCTGCTTACCTACCCTTCAAGGTAAATAGTTCTGGCGTAATGCCCATTATATTCTCCACATCGTCATTGGCTCTTCCTGGTACTCTAGCTCGCTTCACTGGTTTAGCTGCATTAAAGAAAGCTGCACTGGCTCTGAATCCAGGAGGTTCCTTCTATTTACCCACAAACATTCTTCTAATTGCTTTTTTCAACTACTATTACACTTTCTTGCAACTGGACCCTGATGATGTCAGTGAGCAATTGAAGCGCCAAGGTGCATCCATTCCACTTGTCCGGCCAGGTAGAACCACTGCTGCATTTATAAAGACGGTTCTAAGTAGAATATCAGTTCTTGGTTCAGGCTTTTTGGCAATCTTGGCTGCTGGTCCAGCTGTGGTCGAGCAGATCACACACCTGACCGCTTTCCGAGGATTTGCTGGAACATCAGTTCTCATTCTTGTTGGTTGTGCAACAGATACTGCTAGAAAAGTTCAAGCAGAAATTATATCTCAAAAGTACAAAAATATAGAATTCTATGACATTGACAAGTATGGACCGGGAGAGTAG 1650 0.4291 MLITVRAATASAFAASASVGFSSSAHPYFNSSASCRPKTTTCRASFSVHTRPNCSSTKSSIPVSSRNASSFDPLDINRDGFTLNSALDSLVNLLSQMFESASGTKKEKPTSSRGIAAAIEDSSIDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNRDAFVGNLDESSFLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQIYPTLQNLQKREGEAGRKKVLQYTRYASVGFALVQAIGQALYLRPYVNDFSTQWVLSSVALLTIGSVLTTYIGERISDLKLGNGTSLLIFTNIISYLPASFGRTIAQAFQDGNYVGLATIVFSFILLVLGIVYVQEAERKIPINYASRYMSRSGGLQKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLAALKKAALALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGRTTAAFIKTVLSRISVLGSGFLAILAAGPAVVEQITHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDIDKYGPGE* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01191 549 NCBIfam preprotein translocase subunit SecY 137 534 IPR002208 GO:0015031|GO:0016020
Pte10g01191 549 ProSitePatterns Protein secY signature 1. 189 208 IPR030659 -
Pte10g01191 549 FunFam Preprotein translocase subunit SECY, chloroplastic 129 534 - -
Pte10g01191 549 Pfam SecY 190 521 IPR002208 GO:0015031|GO:0016020
Pte10g01191 549 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 130 537 IPR002208 GO:0015031|GO:0016020
Pte10g01191 549 PRINTS Preprotein translocase SecY subunit signature 138 156 - -
Pte10g01191 549 PRINTS Preprotein translocase SecY subunit signature 230 253 - -
Pte10g01191 549 PRINTS Preprotein translocase SecY subunit signature 379 398 - -
Pte10g01191 549 PRINTS Preprotein translocase SecY subunit signature 288 311 - -
Pte10g01191 549 PRINTS Preprotein translocase SecY subunit signature 473 491 - -
Pte10g01191 549 PRINTS Preprotein translocase SecY subunit signature 507 525 - -
Pte10g01191 549 PRINTS Preprotein translocase SecY subunit signature 188 208 - -
Pte10g01191 549 PRINTS Preprotein translocase SecY subunit signature 418 440 - -
Pte10g01191 549 PRINTS Preprotein translocase SecY subunit signature 262 287 - -
Pte10g01191 549 ProSitePatterns Protein secY signature 2. 281 298 IPR030659 -
Pte10g01191 549 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 35 - -
Pte10g01191 549 Hamap Protein translocase subunit SecY [secY]. 126 538 IPR026593 -
Pte10g01191 549 Gene3D SecY subunit domain 129 534 IPR023201 -
Pte10g01191 549 SUPERFAMILY Preprotein translocase SecY subunit 130 528 IPR023201 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01191 45 547 Chloroplast and Mitochondria Gene Families AT2G18710 82.318 0.0 839
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01191 K10956 - qsa:O6P43_022270 848.58