Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01189 ATGCTCTCAAGATCTTGTTTGGACTTGTTGAATTTGATTACCGTGGATGATTATCAAGTTCTGAATCGGAATCTAAAAGTGATGAAAGCCTCTGGGAAAGTATCGGACTTGGGAGTTGAGGACGAAGAAGAAGATAGCGTTGATCACTCTGAAGCAGATGACCCTGTTTCCTCTGTGTTCAAAAAAAGGAGGATCATCGTTTCGAACCAGTTGCCTATAAAGGCATCTCGCGACGTCATGACTAAGGAATGGTGTTTCGAATGGGATAGGGATAGTCTTTATCTTCAGCTTAAAGATGGTTTCGGCCCTCAAGTCGGAGTTCTGTATGTGGGATCGTTAAAAGCAGAGGTCGATGTGTCGGAACAAGACTATGTGGCACAAGTATTGCTTGATAAGTTTCGATGTGTTCCGACGTTTTTGCCTGCTGACATTCAGAACAAGTTCTATCATGGCTTTTGCAAACATTATCTCTGGCCTTTGTTTCATTACATGCTGCCTATGTCACCGAGTCACGGTGAACGGTTTGATAAGTCACAGTGGCAGGCTTATGTGTCTGCTAACAAGATTTTCGCTAATAAAATCACAGAGGTGATTAATCCAGAGAAGGATTGCGTTTGGATTCACGACTACCATCTAATGATCTTGCCGACCTTATTGAGAAAAAAGTTTCATAGAGTTAGGTTGGGGTTCTTTTTACATAGTCCCTTCCCTTCTTCAGAAATCTATCGCACTTTGCCTGTCAGGGATGATATTCTGAAAGCTTTGTTGAATTGTGATTTGGTGGGGTTTCATACATTTGACTATGCTCGACATTTTTTGTCTTGTTGTAGTAGGATGCTTGGTCTAGATTATGAATCGAAAAGGGGTTACATTGGGTTGGAGTATTATGGTAGAACTGTGAGTATCAAGATCTTACCAGCAGGGATTCACATGGGTCAGCTTGAGTCTCTTTTGTCTTCGAATGAAACTGCTGTACTGATCAAGAAATTGAAGGAGCAATATAAAGGGAAATTTGTGCTTCTGGGTGTGGATGATATGGACATATTCAAAGGCATTAGCTTGAAGTTTTTAGCACTAGGGCAACTTTTAGAAGTTCACCAAGAGATGAGAGGAAAAGTGGTACTCGTTCAGATTCTAAACCCGGCAAGAAGCAGTGGAAAAGATATTCAGGATGTGCAGAATGAGACCAATGCTATAGCCAAGCAAATCAATGACAGGTTTGGTGTGCCAGGGTACAAGCCAATTATGGTCGTCAATGGACCGGTAACAACTCAGGAGAAGGCTGCATACTATGCAATTTCTGATTGCTGTATTGTGAATGCTGTGAGGGATGGGATGAATTTGGTGCCTTACAAGTTCACTGTTTGTAGGCAAGGGACTCCTGCCTTGGAGAAAGCATTGGAAATTGACGACGAGTCCGCGAGGGCTAAGAAGAGTGTGATTATCGTGTCCGAATTTATCGGGTGCTCACCTTCTCTAAGCGGTGCAATCCGTGTTAATCCCTGGAACATCGATGATGTTTCCGATGCCATGAATTCCGCCATAACAATGGCTGACACGGAGAAGCATTTGCGCCATGAGAAACATTATAAATATATAAGCTCTCATGATGTTGCTTACTGGGCTCGAAGTTTCGATCAGGATCTTGAAAGAGCATGTGGAGAACTTTACCAAAAGAGATGTTGGGGTGTTGGATTAGGTTTGCAATTCAGAATTGTAGCTTTGGGTCCTAATTTCAGGAAGCTTTCAGTAGAGCACATTGTCGGTGGCTATAAAAACACAAAGAACAGGCTAATCCTCTTAGACTATGATGGTACCATGTCGCCTCAGGGTTCGGTAGACAAAAGTCCAAGCAGTGAAGCTATCTCTGTTTTGAATTGCCTATGTAATGATCCTAAGAACACAGTTTTCATTGTCAGTGGCAGAGGAAAGGATTGCCTAGGCAATTGGTTTTCTCCATGTGAGAAGTTAGGCATTTCAGCTGAACATGGTTTCTTCACAAGATGGACTAGGAATTCTGAATGGGAAACTTGCGGATTGAAAACGGACTGTGGTTGGAAGAATATAGCTGAACCTGTCATGGCACACTACACTGAAGCGACAGATGGTTCTTTCATTGAACAAAAGGAAAGTGCACTTGTTTGGCACCATCAAGAAGCTGATCCACATTTTGGCCCTTGCCAGGCTAAGGAGCTTCTTGATCACCTAGAGAGTGTGCTTGCCAATGAGCCTGTAGTGGTTAAAAGAGGGCAGCACATAGTTGAAGTAAAACCTCAGGGAGTGAGCAAGGGCTTAGTGGTGGAAAACCTTATCTCAGCGATGAATCAATCGCCAGACTTCGTGCTCTGCATAGGGGATGATAGATCAGATGAAGATATGTTTGAGAAGATTGTTGGTTCTGTTTCCATGCCAGAGTTGCTATCCGCAAGAGAAGTCTTTGCATGTACTGTTGGTCAGAAACCAAGTATGGCAAAGTACTATTTGGATGACGCAGGTGAAGTCATCATGTTGCTTCAGGCGCTTGCTTCTGCATTTCAACCTAAACCTGCACATTCTCAGGATTCAAATGTCACAGAACTAGTTTGA 2586 0.4292 MLSRSCLDLLNLITVDDYQVLNRNLKVMKASGKVSDLGVEDEEEDSVDHSEADDPVSSVFKKRRIIVSNQLPIKASRDVMTKEWCFEWDRDSLYLQLKDGFGPQVGVLYVGSLKAEVDVSEQDYVAQVLLDKFRCVPTFLPADIQNKFYHGFCKHYLWPLFHYMLPMSPSHGERFDKSQWQAYVSANKIFANKITEVINPEKDCVWIHDYHLMILPTLLRKKFHRVRLGFFLHSPFPSSEIYRTLPVRDDILKALLNCDLVGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYYGRTVSIKILPAGIHMGQLESLLSSNETAVLIKKLKEQYKGKFVLLGVDDMDIFKGISLKFLALGQLLEVHQEMRGKVVLVQILNPARSSGKDIQDVQNETNAIAKQINDRFGVPGYKPIMVVNGPVTTQEKAAYYAISDCCIVNAVRDGMNLVPYKFTVCRQGTPALEKALEIDDESARAKKSVIIVSEFIGCSPSLSGAIRVNPWNIDDVSDAMNSAITMADTEKHLRHEKHYKYISSHDVAYWARSFDQDLERACGELYQKRCWGVGLGLQFRIVALGPNFRKLSVEHIVGGYKNTKNRLILLDYDGTMSPQGSVDKSPSSEAISVLNCLCNDPKNTVFIVSGRGKDCLGNWFSPCEKLGISAEHGFFTRWTRNSEWETCGLKTDCGWKNIAEPVMAHYTEATDGSFIEQKESALVWHHQEADPHFGPCQAKELLDHLESVLANEPVVVKRGQHIVEVKPQGVSKGLVVENLISAMNQSPDFVLCIGDDRSDEDMFEKIVGSVSMPELLSAREVFACTVGQKPSMAKYYLDDAGEVIMLLQALASAFQPKPAHSQDSNVTELV* 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01189 861 Gene3D Glycogen Phosphorylase B; 56 316 - -
Pte10g01189 861 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 596 713 - -
Pte10g01189 861 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 726 854 - -
Pte10g01189 861 CDD GT20_TPS 63 550 IPR001830 GO:0003824|GO:0005992
Pte10g01189 861 NCBIfam trehalose-phosphatase 595 842 IPR003337 GO:0003824|GO:0005992
Pte10g01189 861 NCBIfam HAD-IIB family hydrolase 598 797 IPR006379 -
Pte10g01189 861 Gene3D Glycogen Phosphorylase B; 317 534 - -
Pte10g01189 861 SUPERFAMILY HAD-like 597 842 IPR036412 -
Pte10g01189 861 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 56 315 - -
Pte10g01189 861 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 63 553 - -
Pte10g01189 861 Pfam Glycosyltransferase family 20 63 550 IPR001830 GO:0003824|GO:0005992
Pte10g01189 861 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 55 843 IPR001830 GO:0003824|GO:0005992
Pte10g01189 861 CDD HAD_TPP 598 830 - -
Pte10g01189 861 Pfam Trehalose-phosphatase 600 830 IPR003337 GO:0003824|GO:0005992
Pte10g01189 861 Gene3D - 596 709 IPR023214 -
Pte10g01189 861 Gene3D - 726 855 IPR023214 -
Pte10g01189 861 FunFam Alpha,alpha-trehalose-phosphate synthase 317 534 - -
Pte10g01189 861 FunFam Trehalose-6-phosphate synthase 2 680 759 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01189 Pte-Chr10 29709890 29713149 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01189 1 844 Trehalose Biosynthesis Gene Families AT2G18700 67.450 0.0 1192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01189 K16055 - qsa:O6P43_002917 1370.14