Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01183 ATGGCAGCTGTCAGCGTTCGCCTTCTCATGTTCGCATGCATGGCTGTTTGTCTGATCTCAGCCGCTTATGCTGCTCAAGGAACTGCGACCTTTTATACCCCACCTTATACGCCTTCTTCATGCTATGGGTTTCAAGGGCAAGGTGTGATGATAGCTGCAGCAAGTGATGCAATATGGAACAACAGGGCAGCATGTGGAAGAAGGTATAGAGTGAGATGCATTGGTGGAACAAATGCTACTCCAAATCCTTGCAAAGGTCGCAGTGTTGTGGTGAAAGTTGTTGACTATTGTCCTCCTGGATGCCGTGCCACCATTGATTTATCTCAGGAGGCATTTGCTGCCATTGCTAATCCTGATGCTGGGAAAATCAGGATTCGGTTTGATCGGGTCTGA 393 0.4809 MAAVSVRLLMFACMAVCLISAAYAAQGTATFYTPPYTPSSCYGFQGQGVMIAAASDAIWNNRAACGRRYRVRCIGGTNATPNPCKGRSVVVKVVDYCPPGCRATIDLSQEAFAAIANPDAGKIRIRFDRV* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01183 130 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 27 130 IPR007112 -
Pte10g01183 130 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 4 128 IPR044206 GO:0009627|GO:0048046
Pte10g01183 130 Gene3D - 22 130 IPR036908 -
Pte10g01183 130 SMART dpbb_1 51 127 IPR007112 -
Pte10g01183 130 FunFam Barwin-related endoglucanase 24 129 - -
Pte10g01183 130 CDD DPBB_EG45-like 25 127 - -
Pte10g01183 130 Pfam Lytic transglycolase 52 126 IPR009009 -
Pte10g01183 130 SUPERFAMILY Barwin-like endoglucanases 14 130 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01183 Pte-Chr10 29668448 29669402 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01183 24 129 Expansin Gene Family AT2G45110 34.109 1.59e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01183 - - qsa:O6P43_002923 209.534